CF417885

Overview
NameCF417885
Unique NameCF417885
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length680
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig487 contig Csv1_Contig487:1..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10AL_ARATH (FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.609e-51
Identity = 105/175 (60.00%), Postives = 121/175 (69.14%), Query Frame = 1
Query:  154 DVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            D +EPDNDP QKMGD SVEVT+E R+AA   K KA++ +SEG  ++AI  LT AI LNPTSAI+Y  RA VY+KL KPNAAIRDA  ALE NPDSAKGYK RGMARA LG+W EAA DLH+AS +DYDEEI   LKK                       VEPNA +++EHRRKY
Sbjct:   96 DTVEPDNDPPQKMGDSSVEVTDENREAAQEAKGKAMEALSEGNFDEAIEHLTRAITLNPTSAIMYGNRASVYIKLKKPNAAIRDANAALEINPDSAKGYKSRGMARAMLGEWAEAAKDLHLASTIDYDEEISAVLKK-----------------------VEPNAHKLEEHRRKY 247          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10A1_CHICK (Hsc70-interacting protein OS=Gallus gallus GN=ST13 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 8.713e-42
Identity = 92/177 (51.98%), Postives = 114/177 (64.41%), Query Frame = 1
Query:  148 NTDVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            N  V+EPDND  Q+MGD +VEVTEEM D AN  K++A++ +SEG L+ A+   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A++ NPDSA+ YK RG A   LG WEEAA+DL +A KLDYDE+    LK                       +V+P A++I EHRRKY
Sbjct:   83 NEGVIEPDNDDPQEMGDENVEVTEEMMDQANEKKMEAINALSEGDLQKAVNLFTDAIKLNPCLAILYAKRASVFVKLQKPNAAIRDCDRAIKINPDSAQTYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLK-----------------------EVQPRAQKIAEHRRKY 236          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10A1_PONAB (Hsc70-interacting protein OS=Pongo abelii GN=ST13 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.065e-39
Identity = 88/174 (50.57%), Postives = 111/174 (63.79%), Query Frame = 1
Query:  157 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            V+EPD D  Q+MGD + E+TEEM D AN  K+ A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E NPDSA+ YK RG A   LG WEEAA+DL +A KLDYDE+    LK                       +V+P A++I EHRRKY
Sbjct:   88 VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLK-----------------------EVQPKAQKIAEHRRKY 238          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10A1_HUMAN (Hsc70-interacting protein OS=Homo sapiens GN=ST13 PE=1 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.065e-39
Identity = 88/174 (50.57%), Postives = 111/174 (63.79%), Query Frame = 1
Query:  157 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            V+EPD D  Q+MGD + E+TEEM D AN  K+ A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E NPDSA+ YK RG A   LG WEEAA+DL +A KLDYDE+    LK                       +V+P A++I EHRRKY
Sbjct:   88 VIEPDTDAPQEMGDENAEITEEMMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLK-----------------------EVQPRAQKIAEHRRKY 238          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10A1_MOUSE (Hsc70-interacting protein OS=Mus musculus GN=St13 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.373e-39
Identity = 88/177 (49.72%), Postives = 111/177 (62.71%), Query Frame = 1
Query:  148 NTDVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            N  V+EPD D  Q+MGD + E+TEEM D AN  K  A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E NPDSA+ YK RG A   LG WEEAA+DL +A KLDYDE+    L+                       +V+P A++I EHRRKY
Sbjct:   84 NEGVIEPDTDAPQEMGDENAEITEEMMDEANEKKGAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLALACKLDYDEDASAMLR-----------------------EVQPRAQKIAEHRRKY 237          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10A5_HUMAN (Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.016e-39
Identity = 87/174 (50.00%), Postives = 111/174 (63.79%), Query Frame = 1
Query:  157 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            V+EPD D  Q+MGD +VE+TEEM D AN  K+ A++++++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAI+D   A+E NPDSA+ YK RG A   LG WEEAA+DL  A KLDYDE+    LK                       +V+P A++I EH RKY
Sbjct:   88 VIEPDTDAPQEMGDENVEITEEMMDQANDKKVAAIEVLNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIQDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAAHDLAFACKLDYDEDASAMLK-----------------------EVQPRAQKIAEHWRKY 238          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10A4_HUMAN (Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.623e-38
Identity = 85/174 (48.85%), Postives = 110/174 (63.22%), Query Frame = 1
Query:  157 VMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            V+EPD D  Q+MGD + E+TEE+ D AN  K+ A++ +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E NPDSA+ YK RG A   LG WEEAA+DL +A K DYDE+    LK                       +V+P A++I EH+RKY
Sbjct:   84 VIEPDTDAPQEMGDENAEITEEVMDQANDKKVAAIEALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKRRGKAHRLLGHWEEAAHDLALACKFDYDEDASAMLK-----------------------EVQPRAQKIAEHQRKY 234          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: F10A1_RAT (Hsc70-interacting protein OS=Rattus norvegicus GN=St13 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.475e-38
Identity = 87/177 (49.15%), Postives = 108/177 (61.02%), Query Frame = 1
Query:  148 NTDVMEPDNDPSQKMGDPSVEVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEIGMALKKVICHLRWYLLYRRFLNSGIWVCQVEPNARRIQEHRRKY 678
            N  V+E D D  Q+MGD + E+TE M D AN  K  A+D +++G+L+ AI   T+AI LNP  AILYA RA V+VKL KPNAAIRD   A+E NPDSA+ YK RG A   LG WEEAA DL +A KLDYDE+    L+                       +V+P A++I EHRRKY
Sbjct:   84 NEGVIEADTDAPQEMGDENAEITEAMMDEANEKKGAAIDALNDGELQKAIDLFTDAIKLNPRLAILYAKRASVFVKLQKPNAAIRDCDRAIEINPDSAQPYKWRGKAHRLLGHWEEAARDLALACKLDYDEDASAMLR-----------------------EVQPRAQKIAEHRRKY 237          
BLAST of CF417885 vs. ExPASy Swiss-Prot
Match: HRP_PLABE (58 kDa phosphoprotein OS=Plasmodium berghei PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.822e-16
Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 1
Query:  208 EVTEEMRDAANMTKLKAVDLISEGKLEDAIGQLTEAIMLNPTSAILYAARAGVYVKLNKPNAAIRDAYVALETNPDSAKGYKIRGMARARLGQWEEAANDLHVASKLDYDEEI 546
            E++EE  +     K +AVDL+   K E+A+ +  + I     SA++Y  RA + + L +P A IRD   AL  N DSA  YKIR  A   LG+WE A  D+    K+DYDE +
Sbjct:  104 ELSEEQIEEICKLKEEAVDLVENKKYEEALEKYNKIISFGNPSAMIYTKRASILLNLKRPKACIRDCTEALNLNVDSANAYKIRAKAYRYLGKWEFAHADMEQGQKIDYDENL 216          
The following BLAST results are available for this feature:
BLAST of CF417885 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
F10AL_ARATH4.609e-5160.00FAM10 family protein At4g22670 OS=Arabidopsis thal... [more]
F10A1_CHICK8.713e-4251.98Hsc70-interacting protein OS=Gallus gallus GN=ST13... [more]
F10A1_PONAB1.065e-3950.57Hsc70-interacting protein OS=Pongo abelii GN=ST13 ... [more]
F10A1_HUMAN1.065e-3950.57Hsc70-interacting protein OS=Homo sapiens GN=ST13 ... [more]
F10A1_MOUSE2.373e-3949.72Hsc70-interacting protein OS=Mus musculus GN=St13 ... [more]
F10A5_HUMAN9.016e-3950.00Protein FAM10A5 OS=Homo sapiens GN=FAM10A5 PE=1 SV... [more]
F10A4_HUMAN2.623e-3848.85Protein FAM10A4 OS=Homo sapiens GN=FAM10A4 PE=1 SV... [more]
F10A1_RAT4.475e-3849.15Hsc70-interacting protein OS=Rattus norvegicus GN=... [more]
HRP_PLABE2.822e-1639.8258 kDa phosphoprotein OS=Plasmodium berghei PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-815 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417885 ID=CF417885; Name=CF417885; organism=Citrus sinensis; type=EST; length=680bp
AATACCTTTTTTCAAGTCCTATCTTCATAGAAAGAGGAAAAAAGTGGTGT
TGACATGTCAGACTCTGTTAAGCATTTTGAAGCAATGAAGTCCAATTTAT
CAACTGAAGATGATGACGACATTGTGGAGTCTGATATTGAGTTGGATAAT
ACTGATGTTATGGAGCCCGACAATGATCCTTCACAAAAGATGGGAGACCC
GTCAGTTGAAGTTACAGAAGAAATGCGTGATGCAGCAAATATGACAAAAC
TAAAAGCAGTAGATTTGATCTCTGAAGGCAAGTTGGAGGATGCCATAGGA
CAACTAACAGAAGCCATAATGTTGAATCCTACTTCAGCAATACTTTATGC
AGCTCGAGCTGGTGTCTATGTTAAACTAAACAAACCTAATGCTGCAATTC
GCGATGCTTATGTAGCTTTAGAGACTAACCCTGACTCAGCAAAAGGATAT
AAAATACGTGGGATGGCAAGGGCCAGGTTGGGCCAGTGGGAAGAAGCTGC
AAATGATTTGCATGTGGCATCAAAATTAGACTACGATGAGGAGATTGGCA
TGGCACTCAAGAAGGTGATATGCCATCTGAGATGGTACTTGCTTTACAGA
CGGTTTCTAAATAGTGGCATATGGGTTTGCCAGGTTGAACCTAATGCTCG
TAGAATTCAAGAACATCGAAGAAAATATGA
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