CF417907

Overview
NameCF417907
Unique NameCF417907
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length254
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417907 vs. ExPASy Swiss-Prot
Match: IFRH_ARATH (Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.282e-21
Identity = 44/61 (72.13%), Postives = 51/61 (83.61%), Query Frame = 3
Query:    6 SNCFAGYFLPTLCQ--PGVSVPPRDKLTILGDGNAKAVFNKETDIATFTIKAVDDPRTIXK 182
            + CF GY+LPTL Q  PG++ PPRDK+TILGDGNAKAV NKE DIA +TIKAVDDPRT+ K
Sbjct:  153 TGCFGGYYLPTLVQFEPGLTSPPRDKVTILGDGNAKAVINKEEDIAAYTIKAVDDPRTLNK 213          

HSP 2 Score: 30.8018 bits (68), Expect = 1.282e-21
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  181 NKVLYIRPPKNTYSFNELV 237
            NK+LYI+P  NT S NE+V
Sbjct:  212 NKILYIKPSNNTLSMNEIV 230          
BLAST of CF417907 vs. ExPASy Swiss-Prot
Match: IFRH_SOLTU (Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.192e-18
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 3
Query:   15 FAGYFLPTLCQPGVSVPPRDKLTILGDGNAKAVFNKETDIATFTIKAVDDPRTIXK 182
            FAGY LP L QPG + PP DK+ ILG GN KAVFNKE DI T+TI AVDDP+T+ K
Sbjct:  155 FAGYSLPNLAQPGAAGPPNDKVVILGHGNTKAVFNKEEDIGTYTINAVDDPKTLNK 210          

HSP 2 Score: 30.8018 bits (68), Expect = 1.192e-18
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  181 NKVLYIRPPKNTYSFNELV 237
            NK+LYI+PP N  + NELV
Sbjct:  209 NKILYIKPPHNIITLNELV 227          
BLAST of CF417907 vs. ExPASy Swiss-Prot
Match: IFRH_TOBAC (Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.034e-16
Identity = 36/58 (62.07%), Postives = 43/58 (74.14%), Query Frame = 3
Query:    9 NCFAGYFLPTLCQPGVSVPPRDKLTILGDGNAKAVFNKETDIATFTIKAVDDPRTIXK 182
            N FA +FLP L Q     PPRDK+ I GDGN KA++ KE DIAT+TI+AVDDPRT+ K
Sbjct:  155 NWFADFFLPNLGQLEAKTPPRDKVVIFGDGNPKAIYVKEEDIATYTIEAVDDPRTLNK 212          

HSP 2 Score: 30.4166 bits (67), Expect = 1.034e-16
Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 1
Query:  181 NKVLYIRPPKNTYSFNELV 237
            NK L++RPP N  SFNE+V
Sbjct:  211 NKTLHMRPPANILSFNEIV 229          
BLAST of CF417907 vs. ExPASy Swiss-Prot
Match: IFRH_LUPAL (Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.094e-15
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 3
Query:    3 ASNCFAGYFLPTLCQPGVSVPPRDKLTILGDGNAKAVFNKETDIATFTIKAVDDPRTIXK 182
            ++NCFAGYF   L Q    +PPRDK+ + GDGN K V+  E D+AT+TIK +DDPRT+ K
Sbjct:  156 SANCFAGYFAGNLSQMKTLLPPRDKVLLYGDGNVKPVYMDEDDVATYTIKTIDDPRTLNK 215          

HSP 2 Score: 27.7202 bits (60), Expect = 1.094e-15
Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  181 NKVLYIRPPKNTYSFNELVRPFGE 252
            NK +Y+RPP+N  +  EL+  + E
Sbjct:  214 NKTVYLRPPENILTHKELIEKWEE 237          
BLAST of CF417907 vs. ExPASy Swiss-Prot
Match: IFRH_MAIZE (Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.284e-12
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 3
Query:   15 FAGYFLPTLCQPGVSVPPRDKLTILGDGNAKAVFNKETDIATFTIKAVDDPRTIXK 182
            FAG+ LP + Q     PP DK  +LGDG+ KAVF +E DIAT+T+ A DDPR   K
Sbjct:  156 FAGFGLPKVGQVLAPGPPADKAVVLGDGDTKAVFVEEGDIATYTVLAADDPRAENK 211          

HSP 2 Score: 33.113 bits (74), Expect = 1.284e-12
Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 1
Query:  181 NKVLYIRPPKNTYSFNELV 237
            NKVLYI+PP NT S NEL+
Sbjct:  210 NKVLYIKPPANTLSHNELL 228          
BLAST of CF417907 vs. ExPASy Swiss-Prot
Match: IFR_CICAR (Isoflavone reductase OS=Cicer arietinum GN=IFR PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.942e-11
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 3
Query:    9 NCFAGYFLPTLCQPGVSVPPRDKLTILGDGNAKAVFNKETDIATFTIKAVDDPRTIXK 182
            + F GYFL  L Q   + PPRDK+ ILGDGN K  +  E D+ T+TI+A +DPRT+ K
Sbjct:  164 HAFTGYFLRNLAQFDATEPPRDKVIILGDGNVKGAYVTEADVGTYTIRAANDPRTLNK 221          
BLAST of CF417907 vs. ExPASy Swiss-Prot
Match: IFR_MEDSA (Isoflavone reductase OS=Medicago sativa GN=IFR PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.537e-11
Identity = 30/58 (51.72%), Postives = 38/58 (65.52%), Query Frame = 3
Query:    9 NCFAGYFLPTLCQPGVSVPPRDKLTILGDGNAKAVFNKETDIATFTIKAVDDPRTIXK 182
            + F GYFL  L Q   + PPRDK+ ILGDGN K  +  E D+ TFTI+A +DP T+ K
Sbjct:  164 HAFTGYFLRNLAQLDTTDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNTLNK 221          
The following BLAST results are available for this feature:
BLAST of CF417907 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
IFRH_ARATH1.282e-2172.13Isoflavone reductase homolog P3 OS=Arabidopsis tha... [more]
IFRH_SOLTU1.192e-1867.86Isoflavone reductase homolog OS=Solanum tuberosum ... [more]
IFRH_TOBAC1.034e-1662.07Isoflavone reductase homolog A622 OS=Nicotiana tab... [more]
IFRH_LUPAL1.094e-1555.00Isoflavone reductase homolog OS=Lupinus albus PE=2... [more]
IFRH_MAIZE1.284e-1253.57Isoflavone reductase homolog IRL OS=Zea mays GN=IR... [more]
IFR_CICAR1.942e-1151.72Isoflavone reductase OS=Cicer arietinum GN=IFR PE=... [more]
IFR_MEDSA2.537e-1151.72Isoflavone reductase OS=Medicago sativa GN=IFR PE=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-837 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_E04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417907 ID=CF417907; Name=CF417907; organism=Citrus sinensis; type=EST; length=254bp
TGGCCTCCAACTGCTTTGCCGGCTATTTTCTTCCCACACTTTGCCAGCCT
GGAGTGAGTGTTCCTCCCAGAGACAAGCTCACCATCCTTGGCGATGGAAA
CGCTAAGGCCGTTTTCAACAAGGAAACTGACATTGCAACCTTTACCATCA
AAGCCGTGGACGATCCAAGAACNATTTGNAAACAAGGTCCTCTACATCAG
ACCTCCTAAAAACACTTACTCATTCAACGAGCTCGTCCGCCCTTTTGGGG
AAAA
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