CF417921

BLAST of CF417921 vs. ExPASy Swiss-Prot
Match: RPAB3_MOUSE (DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Mus musculus GN=Polr2h PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.422e-32
Identity = 71/141 (50.35%), Postives = 103/141 (73.05%), Query Frame = 3

Query:   75 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGTPDTGYYTP-GARKTLADKYEYIMHGKLFKI-GDEGSGK-SLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLL 488
            +LFEDIF V+ IDP+GKKFD+VSR+   S++  M ++LDVN ++YP+ +GDKF + +A TL  DGT D G Y P   R + AD++EY+M+GK+++I GDE S + + +   YVSYGGLLM L+GD + +  FE+D R++LL
Sbjct:    4 ILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLL 144          

BLAST of CF417921 vs. ExPASy Swiss-Prot
Match: RPAB3_HUMAN (DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Homo sapiens GN=POLR2H PE=1 SV=4)

HSP 1 Score: 138.658 bits (348), Expect = 2.422e-32
Identity = 71/141 (50.35%), Postives = 103/141 (73.05%), Query Frame = 3

Query:   75 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGTPDTGYYTP-GARKTLADKYEYIMHGKLFKI-GDEGSGK-SLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLL 488
            +LFEDIF V+ IDP+GKKFD+VSR+   S++  M ++LDVN ++YP+ +GDKF + +A TL  DGT D G Y P   R + AD++EY+M+GK+++I GDE S + + +   YVSYGGLLM L+GD + +  FE+D R++LL
Sbjct:    4 ILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVIASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGGLLMRLQGDANNLHGFEVDSRVYLL 144          

BLAST of CF417921 vs. ExPASy Swiss-Prot
Match: RPAB3_DICDI (DNA-directed RNA polymerases I, II, and III subunit rpabc3 OS=Dictyostelium discoideum GN=polr2h PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.329e-30
Identity = 65/138 (47.10%), Postives = 97/138 (70.29%), Query Frame = 3

Query:   75 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLL 488
            +LFED F V++IDPDGKKFD+VSR   +S+N +M + +D+ + +YP+   ++F M LA +LNLDG+ D        + +LADKY+Y+M+GK+FK   E S  S K  ++ S+GGLL++L+GDP Y+   ELD R++LL
Sbjct:    4 ILFEDTFEVKEIDPDGKKFDRVSRFVCYSENYEMDLQIDIATHIYPLG-HERFKMVLASSLNLDGSSDNSGSYDTNKPSLADKYDYVMYGKIFKYQKENS--SSKVSVFASFGGLLVLLQGDPRYLPGIELDARIYLL 138          

BLAST of CF417921 vs. ExPASy Swiss-Prot
Match: RPAB3_CAEBR (Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Caenorhabditis briggsae GN=rpb-8 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.273e-29
Identity = 60/139 (43.17%), Postives = 93/139 (66.91%), Query Frame = 3

Query:   75 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSG-KSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLL 488
            ++F+D+F V+ +DPDGKKFD+VSR    +++  M +++D+NS++YP++  DKF + LA TL  DG  D G Y P A      +YEY+M+GK++++ D+ SG    +   Y S+GGLLM LKG+   +  FE+D  L+LL
Sbjct:    4 IIFDDMFSVKSVDPDGKKFDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKFRLVLATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDSGTDGGQLAAYASFGGLLMRLKGEAINLHGFEVDMNLYLL 142          

BLAST of CF417921 vs. ExPASy Swiss-Prot
Match: RPAB3_CAEEL (Probable DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Caenorhabditis elegans GN=rpb-8 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.624e-28
Identity = 59/139 (42.45%), Postives = 92/139 (66.19%), Query Frame = 3

Query:   75 VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSG-KSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLL 488
            ++F+D+F V+ +DPDGKKFD+VSR    +++  M +++D+NS++YP++  DK  + LA TL  DG  D G Y P A      +YEY+M+GK++++ D+ +G    K   Y S+GGLLM LKG+   +  FE+D  L+LL
Sbjct:    4 IIFDDMFKVKSVDPDGKKFDRVSRYFCDAESFKMELIIDINSQIYPLKQNDKVRLVLATTLREDGLADEGEYDPKAEYPRIKQYEYVMYGKVYRLEDDDTGTDGGKLAAYASFGGLLMRLKGEAINLHGFEVDMNLYLL 142          

BLAST of CF417921 vs. ExPASy Swiss-Prot
Match: RPAB3_YEAST (DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Saccharomyces cerevisiae GN=RPB8 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.433e-16
Identity = 58/150 (38.67%), Postives = 88/150 (58.67%), Query Frame = 3

Query:   63 MSNIVLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYML-LDVNSELYPMRVGDKFTMALAHTLNLDGTP-----DTGYYTP--GARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLL 488
            MSN  LF+DIF V ++DP   +++KV RIEA S   D   L LD+N EL+P+   D  T+ +A +LNL+ TP      T  + P     ++LAD Y+Y+M+G  +K   E   K L A +Y S+GGLLM L+G+   +++ + +    L+
Sbjct:    1 MSN-TLFDDIFQVSEVDPG--RYNKVCRIEAASTTQDQCKLTLDINVELFPVAAQDSLTVTIASSLNLEDTPANDSSATRSWRPPQAGDRSLADDYDYVMYGTAYKF--EEVSKDLIA-VYYSFGGLLMRLEGNYRNLNNLKQENAYLLI 144          

BLAST of CF417921 vs. ExPASy Swiss-Prot
Match: RPAB3_SCHPO (DNA-directed RNA polymerases I, II, and III subunit RPABC3 OS=Schizosaccharomyces pombe GN=rpb8 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.335e-14
Identity = 49/142 (34.51%), Postives = 77/142 (54.23%), Query Frame = 3

Query:   63 MSNIVLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHTLNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLKGDPSYVSHFELDQRLFLL 488
            MS  VL ++IF V  +D   +K+ +VSRI A S   DM + LD+NS++YP+     F++ +   LN   +PD           L +  +YIM+GK++++ +    K  K  +YVS+GGLLM ++G    +    LD    LL
Sbjct:    1 MSESVLLDEIFTVTSVDK--QKYQRVSRITAVSGQNDMNLTLDINSQIYPLEKDATFSLQITSNLN---SPD-----------LKEAADYIMYGKVYRVEE---AKDEKVSVYVSFGGLLMAIEGSHRKLYRLSLDHVYLLL 123