CF417923

Overview
NameCF417923
Unique NameCF417923
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10253 contig Csv1_Contig10253:464..1155. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 1.154e-113
Identity = 194/221 (87.78%), Postives = 207/221 (93.67%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            RL EAAMG AFLLQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE KNGVKLPSY+GDN+NGDAFD KSR PDP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EHSEQGDRY+ELA+RVDEALGFMAAAGLT+DHP M +TEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH +WVGERTRQL
Sbjct:  137 RLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGERTRQL 357          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 408.683 bits (1049), Expect = 1.507e-113
Identity = 194/221 (87.78%), Postives = 206/221 (93.21%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            RL EAAMG AFLLQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR PDP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EHSEQGDRY+ELA RVDEALGFM AAGLT+DHP M +TEFWTSHECLLLPYEQ+LTRRDSTSG YYDCSAH LWVGERTRQL
Sbjct:  136 RLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQL 356          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 2.570e-113
Identity = 194/221 (87.78%), Postives = 209/221 (94.57%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            +L EAA+G AFLLQGGDCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDPFE  NGVKLPSYKGDNINGD FDEKSR+PDP RLIRAY QSAATLNLLR+FATGGYAAMQRVT+WNLDF E+SEQGDRYQELAHRVDEALGFMAAAGLT+DHP M++T+FWTSHECLLLPYEQALTR DSTSG +YDCSAHM+WVGERTRQL
Sbjct:  109 KLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVENSEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQL 329          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 406.757 bits (1044), Expect = 5.726e-113
Identity = 193/221 (87.33%), Postives = 206/221 (93.21%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            RL EAAMG AFLLQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP+IKVGRMAGQFAKPRSD FE K+GVKLPSY+GDN+NGDAFD KSR PDP+RLIRAYCQSAATLNLLR+FATGGYAAMQR+ QWNLDF EHSEQGDRY+ELA RVDEALGFM AAGLT+DHP M +TEFWTSHECLLLPYEQ+LTRRDSTSG +YDCSAH LWVGERTRQL
Sbjct:  136 RLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERTRQL 356          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 405.601 bits (1041), Expect = 1.276e-112
Identity = 192/221 (86.88%), Postives = 208/221 (94.12%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            +L +AAMG AF+LQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQ+P+IKVGRMAGQFAKPRSDPFE K+GVKLPSY+GDNINGDAFDEKSR+PDP R++RAY QS ATLNLLR+FATGGYAAMQRV+QWNLDF +HSEQGDRY+ELA+RVDEALGFM AAGLT  HP MT+TEFWTSHECLLLPYEQALTR DSTSG YYDCSAHMLWVGERTRQL
Sbjct:   99 KLGQAAMGQAFMLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRGDNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATGGYAAMQRVSQWNLDFTQHSEQGDRYRELANRVDEALGFMGAAGLTSAHPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQL 319          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 403.675 bits (1036), Expect = 4.848e-112
Identity = 192/221 (86.88%), Postives = 207/221 (93.67%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            +L EAA+G AFLLQGGDCAESFKEFNANNIRDTFR+LLQM VVLMFGGQ+P+IKVGRMAGQFAKPRSDP E  NGVKLPSYKGDNINGD FDEKSR+PDP RLIRAY QSAATLNLLR+FATGGYAAMQRVT+WNLDF E+ EQGDRYQELAHRVDEALGFMAAAGLT+DHP M++T+FWTSHECLLLPYEQALTR DSTSG +YDCSAHM+WVGERTRQL
Sbjct:  109 KLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPSYKGDNINGDTFDEKSRIPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVENCEQGDRYQELAHRVDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQL 329          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 403.675 bits (1036), Expect = 4.848e-112
Identity = 189/221 (85.52%), Postives = 210/221 (95.02%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            RLA+AAMG AFLLQGGDCAESFKEFN NNIRDTFRVLLQM  VL FGGQMP+IKVGRMAGQFAKPRS+ FE ++GVKLPSY+GDNINGDAF+EKSR+PDP+R++RAY QSAATLNLLR+FATGGYAAMQRVTQWNLDF +HSEQGDRY+ELAHRVDEALGFM+AAGLT+DHP MTST+FWTSHECLLLPYEQ+LTR+DST+G +YDCSAHMLWVGERTRQL
Sbjct:  142 RLADAAMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKPRSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRMVRAYAQSAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQL 362          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 2.660e-110
Identity = 191/223 (85.65%), Postives = 209/223 (93.72%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKV-GRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGD-RYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            RLA+AAMG AF+LQGGDCAESFKEFNANNIRDTFR+LLQMG VLMFGGQMP++KV GRMAGQFAKPRSD FE ++GVKLPSY+GDNINGD FDEKSRVPDP+R+IRAY QS ATLNLLR+FATGGYAAMQRVTQWNLDF +HSEQGD RY+ELAHRVDEALGFM AAGLT+DHP MT+T+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAHMLWVGERTRQL
Sbjct:  125 RLADAAMGRAFVLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDTFDEKSRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRRYRELAHRVDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGERTRQL 347          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 385.571 bits (989), Expect = 1.366e-106
Identity = 185/221 (83.71%), Postives = 202/221 (91.40%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            RLA+AA+G AFLLQGGDCAESFKEFNA NIRDTFRVLLQM +VL FGGQ+P+IKVGRMAGQFAKPRSD FE K+GVKLPSYKGDNINGD FDEKSR+PDP R+IRAY QSAATLNLLR+FATGGYAA+QRVTQWNLDF E SEQ DRYQELA+RVDEALGFM+A GL  DHP MT+T+F+TSHECLLLPYEQ+LTR DSTSG YYDCSAHM+W GERTRQL
Sbjct:  122 RLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGRMAGQFAKPRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLLRAFATGGYAAIQRVTQWNLDFVEQSEQADRYQELANRVDEALGFMSACGLGTDHPLMTTTDFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQL 342          
BLAST of CF417923 vs. ExPASy Swiss-Prot
Match: AROF_STRCO (Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Streptomyces coelicolor GN=aroH PE=1 SV=3)

HSP 1 Score: 256.529 bits (654), Expect = 9.571e-68
Identity = 123/221 (55.66%), Postives = 161/221 (72.85%), Query Frame = 3
Query:    3 RLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRVLLQMGVVLMFGGQMPIIKVGRMAGQFAKPRSDPFEVKNGVKLPSYKGDNINGDAFDEKSRVPDPERLIRAYCQSAATLNLLRSFATGGYAAMQRVTQWNLDFAEHSEQGDRYQELAHRVDEALGFMAAAGLTLDHPAMTSTEFWTSHECLLLPYEQALTRRDSTSGQYYDCSAHMLWVGERTRQL 665
            R+A  A G AFLLQGGDCAE+F   +A++IR+  + LLQMG VL +   +P++KVGR+AGQ++KPRS P E ++GV LP+Y+GD++NG  F E +R+PDPERL R Y  SA+TLNL+R+F TGGYA +++V  WN DF + S  G RY++LA  +D AL FM A G   D     + EF++SHE LLL YE ALTR DS +GQ YD S HM+W+GERTRQL
Sbjct:   57 RMAAVAKGEAFLLQGGDCAEAFDAVSADHIRNKLKTLLQMGAVLTYAASVPVVKVGRIAGQYSKPRSKPTETRDGVTLPTYRGDSVNGFDFTEAARIPDPERLKRMYHASASTLNLVRAFTTGGYADLRQVHAWNQDFVKSSPSGQRYEQLAREIDNALNFMRACG--TDPAEFQTVEFFSSHEALLLDYESALTRVDSRTGQLYDVSGHMVWIGERTRQL 275          
The following BLAST results are available for this feature:
BLAST of CF417923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AROF_TOBAC1.154e-11387.78Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU1.507e-11387.78Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLLC2.570e-11387.78Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC5.726e-11387.33Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ARATH1.276e-11286.88Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_SOLTU4.848e-11286.88Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ4.848e-11285.52Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ORYSJ2.660e-11085.65Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ARATH1.366e-10683.71Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_STRCO9.571e-6855.66Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Str... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-853 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417923 ID=CF417923; Name=CF417923; organism=Citrus sinensis; type=EST; length=692bp
AGAGGCTCGCAGAGGCTGCCATGGGAAACGCTTTCTTGCTTCAGGGTGGT
GACTGTGCTGAGAGTTTCAAGGAGTTCAATGCTAATAATATTAGGGACAC
TTTCAGAGTGTTGTTGCAGATGGGTGTTGTGCTTATGTTTGGCGGCCAAA
TGCCTATCATTAAGGTGGGAAGAATGGCGGGTCAATTTGCAAAGCCAAGA
TCAGATCCTTTTGAGGTGAAGAATGGAGTGAAGCTGCCGAGCTACAAGGG
AGACAACATCAATGGTGATGCTTTTGATGAGAAATCAAGAGTTCCAGACC
CTGAAAGGTTGATTAGGGCTTACTGCCAGTCTGCTGCAACTCTAAACCTT
CTGAGATCCTTTGCAACGGGAGGTTACGCCGCAATGCAGAGGGTTACTCA
GTGGAATCTTGATTTCGCCGAGCACAGTGAGCAGGGAGATAGGTACCAGG
AACTGGCTCACCGTGTTGACGAGGCCTTAGGATTCATGGCTGCTGCGGGT
CTAACACTTGATCATCCTGCCATGACATCAACAGAATTTTGGACCTCTCA
TGAATGCTTGCTTTTGCCTTATGAGCAAGCACTGACAAGACGAGATTCAA
CTTCTGGCCAGTACTATGACTGCTCTGCTCACATGCTTTGGGTTGGGGAG
CGTACTCGGCAGCTGGGATGGTGCCCATGTAGAGTTCCTAAG
back to top