CF417926

Overview
NameCF417926
Unique NameCF417926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length348
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7731 contig Csv1_Contig7731:658..1007. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: SEC14_SCHPO (Sec14 cytosolic factor OS=Schizosaccharomyces pombe GN=sec14 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 5.831e-16
Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRPVY+E+LG +D  KL Q+TT +R ++  V  +E     +FPAC+  A   I++S +I+D++GVG+ +   +    I +   I  D YPE + + ++INA  GF   +N +K F
Sbjct:  113 GRPVYVEQLGNIDLKKLYQITTPERMMQNLVYEYEMLALKRFPACSRKAGGLIETSCTIMDLKGVGITSI-HSVYSYIRQASSISQDYYPERMGKFYVINAPWGFSSAFNLIKGF 226          
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: SEC14_CANAL (SEC14 cytosolic factor OS=Candida albicans GN=SEC14 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.074e-13
Identity = 39/115 (33.91%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRPVY E LGKVD  K++++TT +R ++  V  +E     + PAC+  A   +++S ++LD+ G+ + + + N    +    KI  D YPE + + ++INA  GF   +   K F
Sbjct:  118 GRPVYFEELGKVDLVKMLKITTQERMLKNLVWEYEAMCQYRLPACSRKAGYLVETSCTVLDLSGISVTS-AYNVIGYVREASKIGQDYYPERMGKFYLINAPFGFSTAFKLFKPF 231          
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: SEC14_YARLI (SEC14 cytosolic factor OS=Yarrowia lipolytica GN=SEC14 PE=3 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 6.034e-13
Identity = 38/115 (33.04%), Postives = 68/115 (59.13%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRPVY+E +GKV+ +++ ++TT +R +R  V  +E     + PAC+      I++S +ILD++GV L + S+     +     I  + YPE + + ++INA  GF  +++ +K F
Sbjct:  117 GRPVYVENVGKVNIHEMYKITTQERMLRNLVWEYESFVRHRLPACSRVVGHLIETSCTILDLKGVSLSSASQ-VYGFLKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKRF 230          
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: SEC14_YEAST (SEC14 cytosolic factor OS=Saccharomyces cerevisiae GN=SEC14 PE=1 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.535e-11
Identity = 35/115 (30.43%), Postives = 65/115 (56.52%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRPVY E LG V+ +++ +VT+ +R ++  V  +E     + PAC+ AA   +++S +I+D++G+ + + + +    +     I  + YPE + + +IINA  GF   +   K F
Sbjct:  118 GRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISS-AYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPF 231          
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: SEC14_KLULA (SEC14 cytosolic factor OS=Kluyveromyces lactis GN=SEC14 PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.535e-11
Identity = 35/115 (30.43%), Postives = 63/115 (54.78%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRPVYIE LG V+  ++ ++TT +R ++  V  +E     + PAC+  A   +++S +ILD++G+ + + +      +     I  + YPE + + ++INA  GF   +   K F
Sbjct:  116 GRPVYIEELGSVNLTQMYKITTQERMLKNLVWEYEAFVRYRLPACSRKAGYLVETSCTILDLKGISISS-AAQVLSYVREASNIGQNYYPERMGKFYLINAPFGFSTAFRLFKPF 229          
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: S14L5_HUMAN (SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE=2 SV=3)

HSP 1 Score: 67.3958 bits (163), Expect = 2.535e-11
Identity = 37/115 (32.17%), Postives = 64/115 (55.65%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRP+YI RLG++D+  LM+    +  +R HV    +    +    T    R I S T +LD++G+ +++  +   + +LR+ ++  DNYPETL ++ I+ A   F +LW  +  F
Sbjct:  325 GRPLYILRLGQMDTKGLMKAVGEEALLR-HVLSVNEEGQKRCEGSTRQLGRPISSWTCLLDLEGLNMRHLWRPGVKALLRMIEVVEDNYPETLGRLLIVRAPRVFPVLWTLISPF 438          
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: YKJ1_YEAST (CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae GN=YKL091C PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.324e-11
Identity = 36/115 (31.30%), Postives = 66/115 (57.39%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRP+Y E LG ++  K+ ++TT  + +R  V+ +E     + PAC+  A   I++S ++LD++G+ L N + +    I  +  I  + YPE + + +II++  GF  ++  VK F
Sbjct:  120 GRPLYFEELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSN-AYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPF 233          
BLAST of CF417926 vs. ExPASy Swiss-Prot
Match: SEC14_CANGA (SEC14 cytosolic factor OS=Candida glabrata GN=SEC14 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.648e-11
Identity = 33/115 (28.70%), Postives = 64/115 (55.65%), Query Frame = 2
Query:    2 GRPVYIERLGKVDSNKLMQVTTMDRYIRYHVQGFEKAFAVKFPACTIAAKRHIDSSTSILDVQGVGLKNFSKNARELILRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSF 346
            GRPVY E LG V+  ++ ++TT +R ++  V  +E     + PAC+ AA   +++S +++D++G+ + + + +    +     I  + YPE + + ++INA  GF   +   K F
Sbjct:  116 GRPVYFEELGAVNLTEMEKITTQERMLKNLVWEYESVVNYRLPACSRAAGYLVETSCTVMDLKGISISS-AYSVLSYVREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPF 229          
The following BLAST results are available for this feature:
BLAST of CF417926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SEC14_SCHPO5.831e-1637.39Sec14 cytosolic factor OS=Schizosaccharomyces pomb... [more]
SEC14_CANAL2.074e-1333.91SEC14 cytosolic factor OS=Candida albicans GN=SEC1... [more]
SEC14_YARLI6.034e-1333.04SEC14 cytosolic factor OS=Yarrowia lipolytica GN=S... [more]
SEC14_YEAST2.535e-1130.43SEC14 cytosolic factor OS=Saccharomyces cerevisiae... [more]
SEC14_KLULA2.535e-1130.43SEC14 cytosolic factor OS=Kluyveromyces lactis GN=... [more]
S14L5_HUMAN2.535e-1132.17SEC14-like protein 5 OS=Homo sapiens GN=SEC14L5 PE... [more]
YKJ1_YEAST4.324e-1131.30CRAL-TRIO domain-containing protein YKL091C OS=Sac... [more]
SEC14_CANGA5.648e-1128.70SEC14 cytosolic factor OS=Candida glabrata GN=SEC1... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-856 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-011_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417926 ID=CF417926; Name=CF417926; organism=Citrus sinensis; type=EST; length=348bp
GGGAAGACCTGTTTACATTGAAAGATTGGGAAAAGTTGATTCTAACAAAC
TTATGCAAGTTACCACTATGGATCGATATATAAGGTATCATGTTCAAGGA
TTTGAAAAAGCCTTTGCAGTAAAGTTTCCAGCTTGTACAATTGCTGCAAA
GAGGCACATTGATTCGAGCACTTCAATTTTAGATGTTCAAGGCGTGGGCC
TTAAGAATTTTTCCAAGAATGCTCGTGAGCTCATTTTGCGGCTGCAGAAG
ATTGATGGTGATAATTATCCTGAGACTCTTCATCAAATGTTTATCATTAA
TGCTGGTCCTGGATTTAGGCTGCTGTGGAACACTGTGAAAAGTTTTCT
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