CF417949

Overview
NameCF417949
Unique NameCF417949
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length703
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8101 contig Csv1_Contig8101:17..717. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.698e-70
Identity = 107/167 (64.07%), Postives = 133/167 (79.64%), Query Frame = 1
Query:   64 ATTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLG 558
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NK+P+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLG
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLG 175          

HSP 2 Score: 57.3806 bits (137), Expect = 1.698e-70
Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 2
Query:  554 LGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 664
            LGQFS VDIAY+PF+ERFQIF S    YDIT GRP L
Sbjct:  174 LGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNL 210          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 1.698e-70
Identity = 107/167 (64.07%), Postives = 133/167 (79.64%), Query Frame = 1
Query:   64 ATTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLG 558
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NK+P+LEHN +V GESLDL+KY+D+NFEGP+LLPDD EK++FA+EL ++ D F    Y+S   KGD   +A  A D +E AL KF+DGPFFLG
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDSEKQQFAEELLAYTDAFNKASYSSIVAKGDVCDEAVAALDKIEAALSKFNDGPFFLG 175          

HSP 2 Score: 57.3806 bits (137), Expect = 1.698e-70
Identity = 27/37 (72.97%), Postives = 29/37 (78.38%), Query Frame = 2
Query:  554 LGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 664
            LGQFS VDIAY+PF+ERFQIF S    YDIT GRP L
Sbjct:  174 LGQFSLVDIAYVPFIERFQIFFSGIKNYDITKGRPNL 210          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 6.332e-64
Identity = 102/166 (61.45%), Postives = 129/166 (77.71%), Query Frame = 1
Query:   67 TTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSF--KGDPAKQAGPAFDYLEKALDKFDDGPFFLG 558
            ++ +E LP  L S +E P LFDGT RLY+ Y CPFAQRAWI RN+KGLQDKI+LV ++LQD+PAWYKEKVY    +P+LEHNGK++GESLDLIKY+DS+FEGP+LLP+DPEKR+FADEL ++ + FT  +Y+    K D + +   A D +E AL KF DGPFFLG
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPEDPEKRQFADELIAYANAFTKALYSPLISKADLSAETVAALDKIEAALSKFGDGPFFLG 174          

HSP 2 Score: 48.9062 bits (115), Expect = 6.332e-64
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 2
Query:  554 LGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 664
            LGQFS VDIAY+  +ER QI+ S   KY+IT GRP L
Sbjct:  173 LGQFSLVDIAYVTIIERIQIYYSHIRKYEITNGRPNL 209          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.516e-59
Identity = 96/167 (57.49%), Postives = 127/167 (76.05%), Query Frame = 1
Query:   64 ATTAQENLPPPLDSKAELPPLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDPEKRKFADELFSHIDTFTNDVYTSFKGDPA--KQAGPAFDYLEKALDKFDDGPFFLG 558
            +++ +E+LPP L S ++ PP+FDGT RLY+ Y CPFAQRAW+TRN KGLQDK++LV ++LQD+PAWYK+KVY    +P+LEH+ +V GESLDLI+Y+DSNF+GP+LLP+D  KR+FADELF+  + FT  +Y+      A   +   A D LE  L KFDDGPFFLG
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAKRQFADELFASANAFTKALYSPLLSHAAVSDEVVAALDKLEADLSKFDDGPFFLG 174          

HSP 2 Score: 43.8986 bits (102), Expect = 1.516e-59
Identity = 20/37 (54.05%), Postives = 24/37 (64.86%), Query Frame = 2
Query:  554 LGQFSQVDIAYIPFVERFQIFLSEEFKYDITAGRPKL 664
            LGQFS  D+AY+  +ER QI+ S    YDI  GRP L
Sbjct:  173 LGQFSLADVAYVTILERVQIYYSHLRNYDIAQGRPNL 209          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: GSTO1_RAT (Glutathione S-transferase omega-1 OS=Rattus norvegicus GN=Gsto1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.648e-12
Identity = 53/163 (32.52%), Postives = 84/163 (51.53%), Query Frame = 1
Query:  121 PLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEH-NGKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDGPFFLGTVQSGGHSLYSI 594
            P+ +G  R+Y    CPFAQR  +    KG++ +I  + +NL+++P W+ EK  P   +P LE+  G +I ES+   +Y+D  +    L PDDP ++   K   ELFS + +    + TSF     K+  P   + L+K   K ++      T   GG+SL  I
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEI--ININLKNKPEWFFEK-NPFGLVPVLENTQGHLITESVITCEYLDEAYPEKKLFPDDPYEKACQKMTFELFSKVPS----LVTSFIRAKRKEDHPGIKEELKKEFSKLEEAMANKRTAFFGGNSLSMI 173          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: GSTO1_CAEEL (Glutathione transferase omega-1 OS=Caenorhabditis elegans GN=gsto-1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11
Identity = 42/106 (39.62%), Postives = 62/106 (58.49%), Query Frame = 1
Query:  118 PPLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHNGKVIGESLDLIKYVDSNFEGPSLLPDDP----EKRKFADEL 423
            PPL  G+ R+Y    CP+A+RA +    KG++ ++  V LN+ D+  WY  K Y   K PA+EHNGKV+ ES  + +Y+D  F    +LP DP    +++  AD L
Sbjct:   18 PPLSKGSFRVYNMRFCPWAERAMLYVAAKGIEAEV--VNLNVTDKLEWYWTKHYQ-GKAPAVEHNGKVVIESGFIPEYLDDAFPETRILPTDPYEKVQQKLLADRL 120          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: GSTO1_PIG (Glutathione S-transferase omega-1 OS=Sus scrofa GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 39/109 (35.78%), Postives = 65/109 (59.63%), Query Frame = 1
Query:  121 PLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHI 435
            P+ +G  R+Y    CPFAQR  +  N KG++ ++  + +NL+++P W+ +K  P   +P LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   EL S +
Sbjct:   18 PVPEGLIRVYSMRFCPFAQRTLLVLNAKGIRHQV--ININLKNKPEWFFQK-NPSGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMVFELSSKV 123          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: GSTO1_HUMAN (Glutathione S-transferase omega-1 OS=Homo sapiens GN=GSTO1 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.521e-11
Identity = 39/119 (32.77%), Postives = 68/119 (57.14%), Query Frame = 1
Query:  121 PLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTS 465
            P+ +G+ R+Y    CPFA+R  +    KG++ ++  + +NL+++P W+ +K  P   +P LE++ G++I ES    +Y+D  + G  LLPDDP ++   K   ELFS + +       S
Sbjct:   18 PVPEGSIRIYSMRFCPFAERTRLVLKAKGIRHEV--ININLKNKPEWFFKK-NPFGLVPVLENSQGQLIYESAITCEYLDEAYPGKKLLPDDPYEKACQKMILELFSKVPSLVGSFIRS 133          
BLAST of CF417949 vs. ExPASy Swiss-Prot
Match: GSTO1_MOUSE (Glutathione S-transferase omega-1 OS=Mus musculus GN=Gsto1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 45/146 (30.82%), Postives = 76/146 (52.05%), Query Frame = 1
Query:  121 PLFDGTPRLYMSYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPVNKIPALEHN-GKVIGESLDLIKYVDSNFEGPSLLPDDPEKR---KFADELFSHIDTFTNDVYTSFKGDPAKQAGPAF-DYLEKALDKFDDG 543
            P+ +G  R+Y    CPFAQR  +    KG++ ++  + +NL+++P W+ EK  P+  +P LE++ G ++ ES+   +Y+D  +    L PDDP K+   K   E FS +      +  SF     K+  P   + LE    K ++G
Sbjct:   18 PVPEGQIRVYSMRFCPFAQRTLMVLKAKGIRHEV--ININLKNKPEWFFEK-NPLGLVPVLENSQGHLVTESVITCEYLDEAYPEKKLFPDDPYKKARQKMTLESFSKVP----PLIASFVRSKRKEDSPNLREALENEFKKLEEG 156          
The following BLAST results are available for this feature:
BLAST of CF417949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
IN21B_ORYSJ1.698e-7064.07Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI1.698e-7064.07Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ6.332e-6461.45Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE1.516e-5957.49Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
GSTO1_RAT2.648e-1232.52Glutathione S-transferase omega-1 OS=Rattus norveg... [more]
GSTO1_CAEEL1.716e-1139.62Glutathione transferase omega-1 OS=Caenorhabditis ... [more]
GSTO1_PIG6.521e-1135.78Glutathione S-transferase omega-1 OS=Sus scrofa GN... [more]
GSTO1_HUMAN6.521e-1132.77Glutathione S-transferase omega-1 OS=Homo sapiens ... [more]
GSTO1_MOUSE8.517e-1130.82Glutathione S-transferase omega-1 OS=Mus musculus ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-879 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_A01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417949 ID=CF417949; Name=CF417949; organism=Citrus sinensis; type=EST; length=703bp
CTTTCTTCTTCAAAGCAAAAGAAAAGCTTTCAGGAAACCTCTAGAGTCTT
ACCTTCCTCAATGGCAACCACAGCGCAAGAGAATCTTCCTCCACCGTTGG
ATTCGAAGGCCGAGCTACCACCTCTGTTCGATGGAACTCCCAGGTTGTAC
ATGTCTTACTCGTGCCCATTTGCTCAGCGTGCGTGGATCACCAGGAACTA
CAAGGGATTACAAGACAAGATTAAGTTAGTTCCACTGAACCTCCAAGATA
GGCCCGCTTGGTACAAGGAGAAGGTTTATCCTGTTAACAAGATTCCAGCA
CTGGAGCACAATGGCAAAGTTATTGGAGAATCTCTTGATTTGATTAAATA
TGTTGACAGCAATTTTGAAGGGCCTTCACTTTTACCTGATGATCCTGAGA
AACGAAAGTTTGCTGATGAACTGTTTTCCCACATCGATACCTTCACCAAC
GATGTGTATACTTCATTCAAAGGAGACCCAGCAAAACAAGCTGGTCCTGC
TTTTGATTACTTAGAGAAGGCCCTTGATAAATTTGATGATGGCCCGTTCT
TCCTTGGGACAGTTCAGTCAGGTGGACATAGCCTATATTCCATTTGTTGA
GAGATTCCAGATCTTCTTATCAGAAGAATTTAAGTATGACATCACTGCAG
GCAGGCCTAAACTGGCAGCATGGGATTGAGGAGTTGAACAAGCTCGATGC
TTA
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