CF417952
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417952 vs. ExPASy Swiss-Prot
Match: ELI_PEA (Early light-induced protein, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.158e-41 Identity = 95/167 (56.89%), Postives = 114/167 (68.26%), Query Frame = 1 Query: 103 RSGANQLSSVK--YLPSLRRNVNLSVRCTAXXXXXXXXXXXX-PTIPKAE---PQPP--KKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNWEVCYAGPCCFGF 579 RS NQ +++ Y+P+LRRNV+L VR A PT P A PQP + P+MST FS++ AFSGPAPERINGRLAMIGFVAA+GVEI+KGQ + QLS GGVAWFLGTSVLL++ASL+P F+GVSVESKS M+SDAE WN + G F Sbjct: 20 RSRVNQFTNIPSVYIPTLRRNVSLKVRSMAEGEPKEQSKVAVDPTTPTASTPTPQPAYTRPPKMSTKFSDLMAFSGPAPERINGRLAMIGFVAAMGVEIAKGQGLSEQLSGGGVAWFLGTSVLLSLASLIPFFQGVSVESKSKSIMSSDAEFWNGRIAMLGLVALAF 186
BLAST of CF417952 vs. ExPASy Swiss-Prot
Match: ELI5_HORVU (High molecular mass early light-inducible protein HV58, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 4.916e-28 Identity = 59/115 (51.30%), Postives = 76/115 (66.09%), Query Frame = 1 Query: 223 PTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLS--DGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNWEVCYAG 561 PT A P+P K + + + AFSGPAPERINGRLAM+GFVAAL VE ++G + Q+ G+AWFL T+ + +VASL+PL +G SVESKS G ++DAELWN G Sbjct: 100 PTTIPAAPKPVTK-KANPSVWDALAFSGPAPERINGRLAMVGFVAALSVEAARGGGLLDQVGMWSSGLAWFLATAGVFSVASLLPLLQGQSVESKSSGIWSADAELWNGRFAMLG 213 HSP 2 Score: 35.8094 bits (81), Expect = 4.916e-28 Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 2 Query: 542 GRFAMLGLVALAFTEFVKGGTLV 610 GRFAMLGLVALA TEF+ G V Sbjct: 207 GRFAMLGLVALAATEFITGAPFV 229
BLAST of CF417952 vs. ExPASy Swiss-Prot
Match: ELI9_HORVU (Low molecular mass early light-inducible protein HV90, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.424e-27 Identity = 72/173 (41.62%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 46 LATQSMLASPVAARVTGIRRSGANQLSSVKYLPSLRRNVNLSVRCTAXXXXXXXXXXXXPTIPKAEPQPPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNWEVCYAG 561 +AT ++S A V + RS A+ + + LP+L R L VR P+ P PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +L++ASLVPL +G S E ++ M ++AELWN G Sbjct: 1 MATMMSMSSFAGAAV--VPRSSASSFGA-RSLPALGRRA-LVVRAQTEG----------PSAP-----PPNKPKASTSIWDEMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAVLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMLG 154 HSP 2 Score: 33.113 bits (74), Expect = 1.424e-27 Identity = 15/23 (65.22%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 542 GRFAMLGLVALAFTEFVKGGTLV 610 GRFAMLGLVALA TE + G + Sbjct: 148 GRFAMLGLVALAATEIITGAPFI 170
BLAST of CF417952 vs. ExPASy Swiss-Prot
Match: ELI6_HORVU (Low molecular mass early light-inducible protein HV60, chloroplastic OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 3.145e-27 Identity = 55/105 (52.38%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 250 PPKKPRMSTGFSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDG-GVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNWEVCYAG 561 PP KP+ ST + AFSGPAPERINGRLAM+GFV AL VE +G + +QL G G AWF T +L++ASLVPL +G S E ++ M ++AELWN G Sbjct: 45 PPNKPKASTSIWDAMAFSGPAPERINGRLAMVGFVTALAVEAGRGDGLLSQLGSGTGQAWFAYTVAMLSMASLVPLLQGESAEGRAGAIMNANAELWNGRFAMIG 149 HSP 2 Score: 31.5722 bits (70), Expect = 3.145e-27 Identity = 14/19 (73.68%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 542 GRFAMLGLVALAFTEFVKG 598 GRFAM+GLVALA TE + G Sbjct: 143 GRFAMIGLVALAATEIITG 161
BLAST of CF417952 vs. ExPASy Swiss-Prot
Match: DS22_CRAPL (Desiccation stress protein DSP-22, chloroplastic OS=Craterostigma plantagineum GN=DSP-22 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26 Identity = 74/188 (39.36%), Postives = 106/188 (56.38%), Query Frame = 1 Query: 34 MAASLATQSMLASPVAARVTGIRRSGANQLSSVKY---LPSLRRNVNLSVRCTAXXXXXXXXXXXXP--TIPKAEPQPPKKPRMSTGFS-EVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSDGFMTSDAELWNWEVCYAGPCCFGF 579 MA+S ++ A + T I R G N L K LP +RRN +VR T P + ++T + ++F+F G APERINGR AMIGFVAA+GVE++ G+DVF+Q+ +GGV WFL TS +L +A+L+P+++G+S E+K++GF SDAE+WN G F Sbjct: 1 MASSTCYATIPAMSCRGQST-ITRFGPNNLFLGKQSYELPLMRRNAKFTVRSMREDNEKEEQQQQKQQQTHDGGPDLTPNRTEVTTKRTVDLFSFDGLAPERINGRSAMIGFVAAVGVELATGRDVFSQVFNGGVMWFLLTSAVLVLATLIPIYRGLSPEAKNNGFWNSDAEIWNGRFAMIGLVALAF 187
BLAST of CF417952 vs. ExPASy Swiss-Prot
Match: CBR_DUNBA (Carotene biosynthesis-related protein CBR, chloroplastic OS=Dunaliella bardawil GN=CBR PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 7.222e-14 Identity = 53/116 (45.69%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 226 TIPKAEPQPPKKPRMSTG--FSEVFAFSGPAPERINGRLAMIGFVAALGVEISKGQDVFAQLSDGGVAWFLGTSVLLTVASLVPLFKGVSVESKSD--GFMTSDAELWNWEVCYAG 561 T P + P PP P +EV FSG APE INGRLAM+GFVAALG E+S G+ V QL D L T VL + ASL+P F K D G T DAE+ N G Sbjct: 47 TPPPSSPSPPPPPPTPAAPTVTEVMGFSG-APEIINGRLAMLGFVAALGAELSTGESVLTQLGDQPTLIAL-TFVLFSAASLIPAF----ARRKGDAMGPFTPDAEMTNGRFAMIG 156 HSP 2 Score: 23.0978 bits (48), Expect = 7.222e-14 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 542 GRFAMLGLVALAFTEFVKG 598 GRFAM+G A+ E ++G Sbjct: 150 GRFAMIGFAAMLVYEGIQG 168 The following BLAST results are available for this feature:
BLAST of CF417952 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417952 ID=CF417952; Name=CF417952; organism=Citrus sinensis; type=EST; length=685bpback to top |