CF417954

Overview
NameCF417954
Unique NameCF417954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11350 contig Csv1_Contig11350:373..1057. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACLY_DICDI (Probable ATP-citrate synthase OS=Dictyostelium discoideum GN=acly PE=1 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.653e-80
Identity = 144/212 (67.92%), Postives = 170/212 (80.19%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP Y ++F E+C+ L ADHGPCVSGAHNTIV ARAGKDLVSSLVSGLLTIGPRFGGAIDD+AR F+DA D  L P +FVE MK KG R+PGIGH IK  D  D+RV LL+ +A THF S KY+EYA++VE YTL KANNL+LNVDG IG LFLDLL  SG+F++ EI EI+++GYLNG F++ RS+GLIGH  DQ+R KQ LYRH  +DV Y
Sbjct:  409 LPPYASKFFEMCLKLVADHGPCVSGAHNTIVAARAGKDLVSSLVSGLLTIGPRFGGAIDDSARVFQDAVDNNLQPSQFVEGMKSKGKRIPGIGHLIKSADEIDKRVVLLKDYAFTHFSSTKYLEYALEVEKYTLQKANNLILNVDGCIGVLFLDLLHSSGLFTQHEIKEIIDVGYLNGFFIVGRSVGLIGHALDQRRNKQGLYRHQADDVHY 620          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACLY_MOUSE (ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.713e-73
Identity = 129/212 (60.85%), Postives = 162/212 (76.42%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP+Y  QFIE+C+M+ ADHGP VSGAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F  A+D G+ P EFV  MKK+G  + GIGHR+K  +N D RV++L+ F + HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE V+IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  872 LPKYSCQFIEMCLMVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1083          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACLY_HUMAN (ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3)

HSP 1 Score: 273.092 bits (697), Expect = 9.713e-73
Identity = 128/212 (60.38%), Postives = 162/212 (76.42%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP+Y  QFIE+C+M+ ADHGP VSGAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F  A+D G+ P EFV  MKK+G  + GIGHR+K  +N D RV++L+ + R HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE ++IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  882 LPKYSCQFIEMCLMVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRNCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1093          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACLY_RAT (ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.269e-72
Identity = 129/212 (60.85%), Postives = 162/212 (76.42%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP+Y  QFIE+C+M+ ADHGP VSGAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F  A+D G+ P EFV  MKK+G  + GIGHR+K  +N D RV++L+ F + HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE V+IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  881 LPKYSCQFIEMCLMVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDFVKQHFPATPLLDYALEVEKITTSKKPNLILNVDGFIGVAFVDMLRNCGSFTREEADEYVDIGALNGVFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1092          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACLY_SHEEP (ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.657e-72
Identity = 128/212 (60.38%), Postives = 162/212 (76.42%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP+Y  QFIE+C+M+ ADHGP VSGAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F  A+D G+ P EFV  MKK+G  + GIGHR+K  +N D RV++L+ + R HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE ++IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  882 LPKYSCQFIEMCLMVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1093          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACLY_BOVIN (ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.657e-72
Identity = 128/212 (60.38%), Postives = 162/212 (76.42%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP+Y  QFIE+C+M+ ADHGP VSGAHNTI+ ARAGKDLVSSL SGLLTIG RFGGA+D AA+ F  A+D G+ P EFV  MKK+G  + GIGHR+K  +N D RV++L+ + R HFP+   ++YA++VE  T SK  NL+LNVDG IG  F+D+L   G F+++E DE ++IG LNG+FVL RS+G IGH  DQKRLKQ LYRHPW+D+ Y
Sbjct:  872 LPKYSCQFIEMCLMVTADHGPAVSGAHNTIICARAGKDLVSSLTSGLLTIGDRFGGALDAAAKMFSKAFDSGIIPMEFVNKMKKEGKLIMGIGHRVKSINNPDMRVQILKDYVRQHFPATPLLDYALEVEKITTSKKPNLILNVDGLIGVAFVDMLRHCGSFTREEADEYIDIGALNGIFVLGRSMGFIGHYLDQKRLKQGLYRHPWDDISY 1083          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACL1_SCHPO (Probable ATP-citrate synthase subunit 1 OS=Schizosaccharomyces pombe GN=SPBC1703.07 PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.330e-71
Identity = 128/212 (60.38%), Postives = 160/212 (75.47%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP Y T+F+E+ + L ADHGPCVSGA NTI+T RAGKDL+SSLV+GLLTIG RFGGA+D AA+ F  AYD GLSP  FV+S +K    +PGIGHRIK  +N D RVEL++ + + +FPS K ++YA+ VE  T SK +NL+LNVDG I   F+DLL   G F+ +E +E + +G LNG+FVL RSIGLIGH  DQKRL+ PLYRHPW+D LY
Sbjct:  402 LPSYATKFLEMVLQLTADHGPCVSGAMNTIITTRAGKDLISSLVAGLLTIGTRFGGALDGAAQEFSKAYDAGLSPRAFVDSCRKANKLIPGIGHRIKSRNNPDLRVELVKGYVKKNFPSTKLLDYALAVENVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFTLEEANEYINLGILNGMFVLGRSIGLIGHHLDQKRLRAPLYRHPWDDFLY 613          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACLY_CAEEL (Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1 PE=2 SV=1)

HSP 1 Score: 266.929 bits (681), Expect = 6.961e-71
Identity = 133/215 (61.86%), Postives = 162/215 (75.35%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFA---RTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP +  +FIEIC+ML ADHGP VSGAHNTIV ARAGKDL+SSL SGLLTIG RFGGA+D AAR F +A+D+G S  +FV  M+KKG  + GIGHR+K  +N D+RVE+L++FA   +         EYA++VE  T +K  NL+LNVDGAI  LF+D+L  SGMF+KQE +E +EIG LNGLFVL RSIG IGH  DQ RLKQ LYRHPW+D+ Y
Sbjct:  882 LPPHANKFIEICLMLTADHGPAVSGAHNTIVCARAGKDLISSLTSGLLTIGDRFGGALDGAARQFSEAFDQGWSANQFVSEMRKKGKHIMGIGHRVKSINNPDKRVEILKRFAMDKKEFAQETPLFEYALEVEKITTAKKPNLILNVDGAIAILFVDILRHSGMFTKQEAEETIEIGSLNGLFVLGRSIGFIGHYLDQSRLKQGLYRHPWDDISY 1096          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACL1_SORMA (ATP-citrate synthase subunit 1 OS=Sordaria macrospora GN=ACL1 PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.714e-69
Identity = 125/212 (58.96%), Postives = 161/212 (75.94%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP Y  +F+E+ +ML ADHGP VSGA NTI+T RAGKDL+SSLV+GLLTIG RFGGA+D AA  F  A+D+GLSP EFV++M+K+   +PGIGHR+K  +N D RVEL++++ +  FPS K ++YA+ VET T SK +NL+LNVDG I   F+DLL   G FS +E ++ + +G LNGLFVL RSIGLI H  DQKRL+  LYRHPW+D+ Y
Sbjct:  442 LPDYAAKFLEMVLMLTADHGPAVSGAMNTIITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIPGIGHRVKSRNNPDLRVELVKEYVKAKFPSSKLLDYALAVETVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDITY 653          
BLAST of CF417954 vs. ExPASy Swiss-Prot
Match: ACL1_NEUCR (Probable ATP-citrate synthase subunit 1 OS=Neurospora crassa GN=B14D6.310 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.924e-69
Identity = 124/212 (58.49%), Postives = 161/212 (75.94%), Query Frame = 2
Query:    5 LPRYCTQFIEICIMLCADHGPCVSGAHNTIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRGLSPYEFVESMKKKGIRVPGIGHRIKRGDNRDQRVELLQKFARTHFPSVKYMEYAVQVETYTLSKANNLVLNVDGAIGSLFLDLLAGSGMFSKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLY 640
            LP Y  +F+E+ +ML ADHGP VSGA NTI+T RAGKDL+SSLV+GLLTIG RFGGA+D AA  F  A+D+GLSP EFV++M+K+   +PGIGHR+K  +N D RVEL++++ +  FPS K ++YA+ VE+ T SK +NL+LNVDG I   F+DLL   G FS +E ++ + +G LNGLFVL RSIGLI H  DQKRL+  LYRHPW+D+ Y
Sbjct:  438 LPDYAAKFLEMVLMLTADHGPAVSGAMNTIITTRAGKDLISSLVAGLLTIGSRFGGALDGAAEEFTKAFDKGLSPREFVDTMRKQNKLIPGIGHRVKSRNNPDLRVELVKEYVKAKFPSTKLLDYALAVESVTTSKKDNLILNVDGCIAVCFVDLLRNCGAFSTEEAEDYLSMGVLNGLFVLGRSIGLIAHYLDQKRLRTGLYRHPWDDITY 649          
The following BLAST results are available for this feature:
BLAST of CF417954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ACLY_DICDI1.653e-8067.92Probable ATP-citrate synthase OS=Dictyostelium dis... [more]
ACLY_MOUSE9.713e-7360.85ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 ... [more]
ACLY_HUMAN9.713e-7360.38ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 ... [more]
ACLY_RAT1.269e-7260.85ATP-citrate synthase OS=Rattus norvegicus GN=Acly ... [more]
ACLY_SHEEP1.657e-7260.38ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV... [more]
ACLY_BOVIN1.657e-7260.38ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV... [more]
ACL1_SCHPO5.330e-7160.38Probable ATP-citrate synthase subunit 1 OS=Schizos... [more]
ACLY_CAEEL6.961e-7161.86Probable ATP-citrate synthase OS=Caenorhabditis el... [more]
ACL1_SORMA1.714e-6958.96ATP-citrate synthase subunit 1 OS=Sordaria macrosp... [more]
ACL1_NEUCR2.924e-6958.49Probable ATP-citrate synthase subunit 1 OS=Neurosp... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-884 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_A06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417954 ID=CF417954; Name=CF417954; organism=Citrus sinensis; type=EST; length=686bp
CAGCCTTCCCCGCTACTGTACCCAATTTATTGAGATATGCATAATGTTAT
GCGCTGATCATGGCCCCTGTGTTTCTGGTGCTCACAACACTATAGTGACA
GCAAGAGCTGGAAAGGATCTTGTTTCCAGCCTTGTGTCAGGTTTGCTCAC
AATTGGTCCCCGATTTGGTGGCGCCATTGATGATGCTGCCCGATATTTCA
AGGATGCTTATGACCGGGGTCTTTCACCCTATGAATTTGTTGAATCAATG
AAAAAGAAGGGCATTCGTGTGCCAGGAATTGGGCACAGGATCAAGAGAGG
AGATAACAGAGACCAAAGAGTGGAGCTGCTACAAAAATTTGCACGCACTC
ATTTCCCTTCTGTGAAGTATATGGAATATGCTGTTCAAGTTGAAACCTAC
ACTCTATCAAAAGCAAACAACCTGGTTCTTAATGTAGATGGTGCAATTGG
GTCCCTTTTCTTGGATCTTCTTGCCGGCAGTGGAATGTTCAGCAAGCAAG
AAATCGATGAGATAGTGGAAATTGGATATCTGAATGGGCTCTTTGTTCTG
GCACGCTCCATCGGTTTGATTGGGCATACCTTTGACCAGAAGAGATTGAA
ACAACCTCTATACCGTCACCCATGGGAAGATGTTCTCTACACCAAGTAAT
TCACTTTACCGGCAACAGGTGGGAAATCATAATCAA
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