CF417972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: SPA2_ARATH (Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2) HSP 1 Score: 319.701 bits (818), Expect = 9.285e-87 Identity = 149/180 (82.78%), Postives = 166/180 (92.22%), Query Frame = 1 Query: 1 IANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 540 IANVCCVQFS SSHLLAFGS+D+RTYCYDLRN R PWC+L+GH KAVSY KFLD+ TLVTASTDN LKLWDLK+T+H G STNACSLTF GHTNEKNFVGLST+DGYIACGSE+NEVYAYHRSLPMPITSYKFGSIDPISGKE ++DN LFVSSVCWR+RS+MVV+A+S+G IKVLQ+V Sbjct: 857 IANVCCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPMPITSYKFGSIDPISGKEIEEDNNLFVSSVCWRKRSNMVVSASSNGSIKVLQLV 1036
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: SPA1_ARATH (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 3.910e-77 Identity = 130/179 (72.63%), Postives = 159/179 (88.83%), Query Frame = 1 Query: 4 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 540 ANVCCVQFS++S+HLLAFGSADY+ YCYDLR + PWC LAGHEKAVSYVKF+DS T+V+ASTDN LKLW+L +T+ +G S ACSLT+ GHTN+KNFVGLS DGYIACGSE+NEVY+Y++SLPMP+TSYKFGS+DPISG E DDNG FVSSVCWR++S+M+VAANS+G +K+L++V Sbjct: 851 ANVCCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETNEVYSYYKSLPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWRKKSNMLVAANSTGNMKLLKLV 1029
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: SPA4_ARATH (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.446e-55 Identity = 107/180 (59.44%), Postives = 135/180 (75.00%), Query Frame = 1 Query: 4 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSL-TFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 540 AN+CCVQF + + LAFGSAD++ Y YDLRN + P C + GH K VSYV+F+DS TLV++STDN LKLWDL S + S N L +F GHTN KNFVGLS +DGYIA GSE+NEV+ YH++ PMP+ SYKF +IDP+S E DD + F+SSVCWR +S +VAANS+G IK+L+MV Sbjct: 619 ANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDL---SMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDAS-QFISSVCWRGQSSTLVAANSTGNIKILEMV 794
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: SPA3_ARATH (Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.207e-55 Identity = 106/180 (58.89%), Postives = 134/180 (74.44%), Query Frame = 1 Query: 4 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSL-TFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVLQMV 540 ANVCCVQF + S LAFGSAD++ Y YDLRN + P C + GH K VSYVKF+DS TLV++STDN LKLWDL S + S N L +F+GHTN KNFVGLS +DGYIA GSE+NEV+ YH++ PMP+ SY F + D +SG E DD + F+SS+CWR +S +VAANS+G IK+L+M+ Sbjct: 669 ANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTLVSSSTDNTLKLWDL---SMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVMSYMFNNTDSMSGLEVDDAS-QFISSICWRGQSSTLVAANSNGNIKILEMM 844
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: COP1_ARATH (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44 Identity = 88/176 (50.00%), Postives = 118/176 (67.05%), Query Frame = 1 Query: 4 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 531 AN+CCV+++ SS+ +A GSAD+ + YDLRN P V +GH+KAVSYVKFL + L +ASTD+ L+LWD+K N TF GHTNEKNFVGL+ Y+ACGSE+NEVY YH+ + P+TS++FGS D +E + F+S+VCW+ S ++ ANS G IKVL Sbjct: 506 ANICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVK--------DNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPDMDDAEE--EAGSYFISAVCWKSDSPTMLTANSQGTIKVL 671
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: RFWD2_MOUSE (E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42 Identity = 87/184 (47.28%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 4 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKE-TDDDNGLFVSSVCWRRRSD----MVVAANSSGCIKVLQMV 540 ANVCCV+FS S + LAFG AD+ + YDLRN + P V GH KAVSY KF+ +V+ASTD++LKLW++ + C +F GH NEKNFVGL++ YIACGSE+N +Y Y++ L + ++KF ++ + K+ +DD FVS+VCWR SD +++AANS G IKVL++V Sbjct: 558 ANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP--------YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAANSQGTIKVLELV 733
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: COP1_PEA (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.552e-41 Identity = 83/176 (47.16%), Postives = 115/176 (65.34%), Query Frame = 1 Query: 4 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKETDDDNGLFVSSVCWRRRSDMVVAANSSGCIKVL 531 AN+CCV+++ S + +A GSAD+ + YDLRN P V GH+KAVSYVKFL + L +ASTD+ L+LWD+K+ N TF GH NEKNFVGL+ YIACGSE+NEV+ YH+ + P+T ++FG++D + D+ F+S+VCW+ ++ ANS G IKVL Sbjct: 503 ANICCVKYNPGSGNYIAVGSADHHIHYYDLRNISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQ--------NLPVRTFRGHANEKNFVGLTVRSEYIACGSETNEVFVYHKEISKPLTWHRFGTLDMEDAE--DEAGSYFISAVCWKSDRPTILTANSQGTIKVL 668
BLAST of CF417972 vs. ExPASy Swiss-Prot
Match: RFWD2_HUMAN (E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41 Identity = 86/184 (46.74%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 4 ANVCCVQFSAHSSHLLAFGSADYRTYCYDLRNARAPWCVLAGHEKAVSYVKFLDSGTLVTASTDNKLKLWDLKRTSHTGSSTNACSLTFSGHTNEKNFVGLSTADGYIACGSESNEVYAYHRSLPMPITSYKFGSIDPISGKE-TDDDNGLFVSSVCWRR----RSDMVVAANSSGCIKVLQMV 540 ANVCCV+FS S + LAFG AD+ + YDLRN + P V GH KAVSY KF+ +V+ASTD++LKLW++ + C +F GH NEKNFVGL++ YIACGSE+N +Y Y++ L + ++KF ++ + K+ +DD FVS+VCWR S++++AANS G IKVL++V Sbjct: 556 ANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKP--------YCLRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 731 The following BLAST results are available for this feature:
BLAST of CF417972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417972 ID=CF417972; Name=CF417972; organism=Citrus sinensis; type=EST; length=693bpback to top |