CF418019

Overview
NameCF418019
Unique NameCF418019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF418019 vs. ExPASy Swiss-Prot
Match: FBL34_ARATH (F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana GN=At1g67190 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 6.641e-36
Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = 3 
Query:    6 FPQLSHLSLSYDLKDGVLHYGLQGSANLENVAVLELGWPVISDLFSHWVEGLLKRCPNLRRLVIFGVISEIKTHEECLLLAKFTSSIVQLMRKYLHVEVQ 305
            F  L+HLSLSYDLKDG  HY LQG+  LENV VLELGW VI+D+FS WVE LL+RCPNL++L+I+GV+SE KT  +C +LA FT SIVQLMRKY+HVEVQ
Sbjct:  316 FSHLTHLSLSYDLKDGAAHYSLQGTTQLENVTVLELGWTVINDVFSIWVEELLRRCPNLKKLIIYGVVSETKTQGDCQILATFTWSIVQLMRKYIHVEVQ 415
The following BLAST results are available for this feature:
BLAST of CF418019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL34_ARATH6.641e-3670.00F-box/LRR-repeat protein At1g67190 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-949 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-012_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF418019 ID=CF418019; Name=CF418019; organism=Citrus sinensis; type=EST; length=461bp
TTTGTTTCCCGCAGCTGAGCCATCTGTCATTGAGTTATGACTTGAAAGAT
GGGGTGCTTCATTATGGTCTGCAAGGGTCTGCTAATTTGGAGAATGTGGC
TGTGCTGGAGCTTGGATGGCCTGTCATTAGTGATCTGTTCTCACATTGGG
TTGAGGGTCTCCTAAAACGATGCCCAAATCTTAGGAGGTTGGTAATTTTT
GGTGTTATTTCAGAGATAAAAACCCATGAAGAATGTCTGTTGTTGGCAAA
ATTTACGTCATCCATTGTTCAGCTCATGAGGAAATATTTGCATGTGGAGG
TGCAATTTGACTACGAGTAAAACTTCTTTGAATTTTTTTAGTTAGATAAT
TCAAGTTTGGTTTACCTATGAATTGTATGAGCACGAGTGCAGGTACAGTC
CCCAAGAATCAATTTCTTGTTGTGCCCATAAAGGATGGTTGAAGCTTTTT
GATTAAAATTT
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