CF503847

Overview
NameCF503847
Unique NameCF503847
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length536
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF503847 vs. ExPASy Swiss-Prot
Match: MYBG_DICDI (Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.103e-22
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 3 
Query:  345 FDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKNGTAEHL 464
            FDRDWKKIE+F+GSKTVIQIRSHAQKYF+KVQKN T E +
Sbjct:   59 FDRDWKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGERI 98

HSP 2 Score: 49.2914 bits (116), Expect = 3.103e-22
Identity = 22/31 (70.97%), Postives = 25/31 (80.65%), Query Frame = 2 
Query:  194 SKKIRKPYTITKSRESWTEPEHDKFLEALQL 286
            S K RKPYTI+K RE+WT+ EH KFLEAL L
Sbjct:   28 SLKSRKPYTISKQRENWTDEEHQKFLEALTL 58
The following BLAST results are available for this feature:
BLAST of CF503847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MYBG_DICDI3.103e-2282.50Myb-like protein G OS=Dictyostelium discoideum GN=... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-334 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-10_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503847 ID=CF503847; Name=CF503847; organism=Citrus sinensis; type=EST; length=536bp
GCAACTAAAAACTAAAACCTCCAAACAAAAAGATTTGATGGTATCAAAAA
TCCCGAACCCGGCAGAAGGATTCTACTTGGATCCTAATGGCATGGCCTTA
CCTGGACTCGGACCTTTCGCCTCGTCAGCTACAACGCCAACGGCAGCAGC
TGCTGCCGCCGGGACGTCAACGGTGTCCACGTCGGAGGATCCGAGTAAGA
AGATCCGGAAACCGTATACAATCACCAAGTCTAGAGAGAGCTGGACCGAA
CCCGAGCACGACAAGTTCCTTGAAGCTCTTCAGCTGATTACTGGTTCTTT
ATTGATGCGAGAGAGAATATTGTCTTGGAGAAATTCATTTAAGATTTGAC
CGTGACTGGAAGAAGATTGAAGCATTTATTGGGTCAAAGACGGTTATTCA
GATTCGCAGTCATGCACAGAAGTACTTTCTAAAGGTGCAGAAGAATGGAA
CAGCTGAACATTTACCTCCGCCCAGGCCTAAAAGGAAAGCTGCTCATCCT
TATCCTCAAAAGGCCTCGAAAAATGCTCCAATGCTC
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