CF503922

Overview
NameCF503922
Unique NameCF503922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 5.666e-30
Identity = 63/92 (68.48%), Postives = 73/92 (79.35%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 583
            +GGPSW VPLGRRDS  A  ALAN NLP PF TL +LK+SF+NVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTL+ T+LQ
Sbjct:  141 AGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQ 232          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 5.666e-30
Identity = 63/92 (68.48%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 583
            +GGPSW VPLGRRDS  A   LAN NLP PF TL +LK SFRNVGLN   DLVALSG HTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ
Sbjct:  142 AGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQ 233          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.400e-30
Identity = 63/92 (68.48%), Postives = 72/92 (78.26%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 583
            +GGPSW VPLGRRDS  A   LAN NLP PF TL +LK+SFRNVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTL+ T+LQ
Sbjct:  142 AGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQ 233          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.673e-29
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 583
            +GGPSW VPLGRRDS  A   LAN NLP PF TL +LK++F+NVGL+   DLVALSGAHTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ
Sbjct:  143 AGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQ 234          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.673e-29
Identity = 62/92 (67.39%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 583
            +GGPSW VPLGRRDSR A   LAN NLP P  TL ELK++F NVGLN   DLVALSG HTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ
Sbjct:  121 AGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQ 212          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.927e-28
Identity = 59/91 (64.84%), Postives = 67/91 (73.63%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFL 580
            +GGPSW VP GRRDS      LAN NLPGP  TL  LK  FRNVGL+   DLVALSG HTFG+ QCQF   RLY+F+N+GKPDPTLD ++L
Sbjct:  136 AGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYL 226          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.182e-27
Identity = 63/95 (66.32%), Postives = 69/95 (72.63%), Query Frame = 2
Query:  296 SWLQSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFL 580
            S L SGGP W VPLGRRDS  A   LAN  LP PF TL +LK +F +VGLN   DLVALSG HTFGRAQCQF   RLY+FN T +PDPTLD T+L
Sbjct:  137 SVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYL 231          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27
Identity = 61/95 (64.21%), Postives = 71/95 (74.74%), Query Frame = 2
Query:  296 SWLQSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFL 580
            S L SGGP W VPLGRRDS  A  ALAN  LP PF TL +LK++F +VGLN   DLVALSG HTFG+AQCQF   RLY+FN T +PDP+L+ T+L
Sbjct:  137 SVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYL 231          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.543e-27
Identity = 59/92 (64.13%), Postives = 69/92 (75.00%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQ 583
            +GGPSW VPLGRRDS  A   LAN NLP PF TL +LK +F  VGL+   DLVALSG HTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ
Sbjct:  140 AGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQ 231          
BLAST of CF503922 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.015e-27
Identity = 58/91 (63.74%), Postives = 68/91 (74.73%), Query Frame = 2
Query:  308 SGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFL 580
            +GGPSW VP GRRDS      LAN NLP PF TL++LK  F+NVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTLD ++L
Sbjct:  134 AGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYL 224          
The following BLAST results are available for this feature:
BLAST of CF503922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
PER32_ARATH5.666e-3068.48Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER1A_ARMRU5.666e-3068.48Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER34_ARATH7.400e-3068.48Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH3.673e-2966.30Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER1C_ARMRU3.673e-2967.39Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER2_ARMRU6.927e-2864.84Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER3_ARMRU1.182e-2766.32Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER23_ARATH1.543e-2764.21Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER1B_ARMRU1.543e-2764.13Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER37_ARATH2.015e-2763.74Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-410 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503922 ID=CF503922; Name=CF503922; organism=Citrus sinensis; type=EST; length=583bp
GTGGACTCCATTATTTAAAAGGGGTGATTTATTGACTATGGTGCATTAGC
TACACTGTATGGTACCAAAATTGCTACACCGTATGGCAATATAGTGAATA
TTGACGGATAAATTGTTACCGACAGCGAGACACTTTTTACTGCGCTGGTG
CATCGTAGTAGCAAGGCCTTAGTTTTAAACTTAAAAGTTTTCTTCTTTTG
TTATACGACAAAGTTTTGATTCAACGGCTAGCAAATTAAATAGTCCGCCC
CAAACGCACATCTCTTAAGATTATTGCTGATTTTGAGTGAATGGCTCTTG
GTTACAGTCAGGGGGTCCGTCATGGGCAGTTCCATTGGGAAGAAGAGACA
GCAGAACGGCAAACAGAGCTCTTGCAAATCAGAATCTTCCAGGACCATTT
GATACTCTTGATGAGCTCAAATCTAGTTTTAGAAATGTTGGCCTCAATGA
CAAGCTTGATCTTGTTGCACTCTCCGGAGCACACACGTTCGGAAGGGCTC
AGTGCCAATTTTTCAGGGGCAGATTATACGATTTTAACAACACTGGCAAG
CCAGACCCAACCCTAGACGCAACCTTCTTACAA
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