CF503935

Overview
NameCF503935
Unique NameCF503935
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length584
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11015 contig Csv1_Contig11015:23..606. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.705e-48
Identity = 99/181 (54.70%), Postives = 125/181 (69.06%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            D+   +A QL   ++LPM ++T  EL + EI+ K GPGA L  SDIA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M +++ + M  ILESYKG
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKG 196          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.753e-47
Identity = 96/181 (53.04%), Postives = 127/181 (70.17%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M +++++ M  ILE+YKG
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKG 197          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 3.906e-47
Identity = 95/181 (52.49%), Postives = 127/181 (70.17%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +++  +A QLA  ++LPM ++T  EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDAIL+GGIPFN+A+G+  FEY G DP+FNK FN  M +++++ M  ILE+YKG
Sbjct:   17 EEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKG 197          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 8.701e-47
Identity = 93/183 (50.82%), Postives = 130/183 (71.04%), Query Frame = 1
Query:   43 ERDQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            E +++   A +LA  ++LPM +++  EL + E++ K GPGA +  S++AAQL T+N DAP+MLDRILRLLASYSV+ C+L      G  RLYSL  V K+   N+DGV +  L+ + QDKV ++SW  LKDA+LEGGIPFN+A+G+  FEY G DP+FNK FN  M N+++++M  ILE Y+G
Sbjct:   15 EEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQG 197          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.136e-46
Identity = 91/181 (50.28%), Postives = 127/181 (70.17%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            D++F +A QLA  ++LPM +++  EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+LRLLA+YSV+ C+L         RLYSL  V K    N DGV + PL+ + QDKV ++SW  L DA+L+GG+PFN+A+G+  FEY G DP+FNK FN  M +++++ M  ILE YKG
Sbjct:   13 DEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYKG 193          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.938e-46
Identity = 97/181 (53.59%), Postives = 124/181 (68.51%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            D+   +A QL   ++LPM ++T  EL + EI+ K GPGA L  SDIA+ L TKN +AP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY G DP+FNK FN  M  ++ + M  ILE+YKG
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKG 196          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 2.532e-46
Identity = 88/186 (47.31%), Postives = 130/186 (69.89%), Query Frame = 1
Query:   34 VDGERDQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            ++ + +++F +A QLA  ++LPM +++  EL + E++ K G GA +  +++AAQLLT N +A +MLDRILRLL SY+++EC L      G +RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ M  ILE+Y G
Sbjct:   10 INSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTG 195          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.640e-46
Identity = 89/181 (49.17%), Postives = 127/181 (70.17%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +++  +A  LA  ++LPM +++  EL + E++ K GPGA +  S++AAQL T N +AP+MLDRILRLLA+YSV++C L+     G  RLY L  V K+   N DGV + PL+ + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY G DP+FNK FN  M N++++ M  ILE Y+G
Sbjct:    4 EEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRG 184          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 9.621e-46
Identity = 90/181 (49.72%), Postives = 125/181 (69.06%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            D++F +A QLA  ++LPM ++   EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+ RLLA+YSV+ C+L         RLYSL  V K+   N DGV + P++ + QDKV ++SW  L DA+L+GG+PFN+A+G+  FEY G DP+FNK FN  M ++T+L M  ILE Y G
Sbjct:   13 DEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTG 193          
BLAST of CF503935 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.256e-45
Identity = 94/181 (51.93%), Postives = 127/181 (70.17%), Query Frame = 1
Query:   49 DQSFAYANQLAMGTMLPMAIQTVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLD--ASG-ARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPKFNKHFNTAMYNYTSLVMSNILESYKG 582
            +++  +A QLA  ++LPM ++   EL + EI+ K GPG  L  +DIA+QL TKN DAP+MLDR+LRLLASYS++  SL   A G   RLY L  V K+   N++GV + PL  + QDKV L+SW  LKDA+LEGGIPFN+A+G+  FEY G DP+FNK FN  M +++++ M  ILE+YKG
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKG 197          
The following BLAST results are available for this feature:
BLAST of CF503935 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT3_POPKI2.705e-4854.70Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_POPKI1.753e-4753.04Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM3.906e-4752.49Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CATRO8.701e-4750.82Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CAPAN1.136e-4650.28Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT2_POPTM1.938e-4653.59Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT2_OCIBA2.532e-4647.31Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_COFCA5.640e-4649.17Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CAPCH9.621e-4649.72Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_PRUDU1.256e-4551.93Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-423 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503935 ID=CF503935; Name=CF503935; organism=Citrus sinensis; type=EST; length=584bp
GAGAAATTCAAGAAACTTAAAATGGATTCTATAGTTGATGGAGAAAGAGA
CCAAAGCTTTGCATATGCTAATCAATTGGCGATGGGTACAATGCTACCCA
TGGCCATTCAAACGGTGTATGAGCTAGGCATTTTCGAGATCCTAGACAAA
GTTGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAGCCCAATTGCT
CACCAAGAACAAAGACGCACCCATGATGCTGGATCGGATTCTCAGGCTTC
TGGCTAGCTACAGCGTTGTTGAATGCTCACTTGATGCTTCTGGTGCCCGG
AGACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGCCTAACAAAGA
TGGCGTCTTACTAGGACCCCTAATACAAATAGTTCAGGACAAGGTCTTTC
TGAAGAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGGAGGAATTCCA
TTTAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAGGATTGGACCC
TAAGTTCAATAAACATTTTAACACAGCAATGTATAACTATACCTCTCTGG
TTATGAGCAACATTCTTGAATCTTACAAGGGTTT
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