CF503967

Overview
NameCF503967
Unique NameCF503967
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1212 contig Csv1_Contig1212:50..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.152e-54
Identity = 102/172 (59.30%), Postives = 133/172 (77.33%), Query Frame = 3
Query:   93 AAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNGAHVTSNALSLINKFAGKH 608
            A+     +FI++SC  TTYPA+C QSLSAYA +IQ +P++LA TAL VSL+R Q A++F+ +L KF+ LK R+Y AI DCL+E+ D++DR+S+S  E+ ++  AKG DF + MSNVETWVSAALTDE TC DGF GK ++GK+K SVRAQVV  A VTSNAL+L+N FA KH
Sbjct:   20 ASAAPANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKH 191          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16
Identity = 49/158 (31.01%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  120 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNGAHVTSNALSLI 587
            ++SSC ST YP LC  +++A   + ++   Q  V  +S++++      ++  + KL K  NL  RE  A+ DCL+ + +T+D L K+V++L      K      H  +++T +SAA+T++ TC DGF        V+ ++    V+   + SNAL++I
Sbjct:   69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKK--SLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.912e-16
Identity = 49/158 (31.01%), Postives = 87/158 (55.06%), Query Frame = 3
Query:  120 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNGAHVTSNALSLI 587
            ++SSC ST YP LC  +++A   + ++   Q  V  +S++++      ++  + KL K  NL  RE  A+ DCL+ + +T+D L K+V++L      K      H  +++T +SAA+T++ TC DGF        V+ ++    V+   + SNAL++I
Sbjct:   69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKK--SLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 46/157 (29.30%), Postives = 91/157 (57.96%), Query Frame = 3
Query:  120 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNGAHVTSNALSLI 587
            +RSSC ST YP LC+ ++         S + +   +++++++  +     V KL +K + L  RE  A+ DCL+ + +T+D L ++V++L H+   K +    H  +++T +S+A+T++ TC DGF     + +V+ ++    ++  H+ SNAL++I
Sbjct:   59 LRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDL-HLYPTK-KTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMI 213          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 6.425e-15
Identity = 48/168 (28.57%), Postives = 89/168 (52.98%), Query Frame = 3
Query:   87 VTAAGIADTRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKL-RKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNGAHVTSNALSLI 587
            +T         ++S C ST YP LC  +++A       S +++   +L+++    +     V KL  K + L  RE  A+ DCL+ + +T+D L  +V++L+   + K      H  +++T +S+A+T++ TC DGF     + KV+ ++    V+  H+ SNAL++I
Sbjct:   51 ITTLSSTSHAILKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLETIDETLDELHVAVEDLHQYPKQKS--LRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.189e-14
Identity = 52/164 (31.71%), Postives = 80/164 (48.78%), Query Frame = 3
Query:  120 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFG---GKALEGKVKSSVRAQVVNGAHVTSNALSLINKFAG 602
            +++ C +T YP+ C  S+S+   S    P  L   +L V++    S   F +KLR       R  +AI  C    GD +DRL+ S+  L  +           +SNVETW+SAALTD++TC D  G     A  G ++  +   + N     SN+L+++ K  G
Sbjct:   77 LKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKLSLRVAIDELSS---FPSKLRANAEQDARLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA--SVSNVETWLSAALTDQDTCLDAVGELNSTAARGALQ-EIETAMRNSTEFASNSLAIVTKILG 234          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11
Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = 3
Query:  120 IRSSCKSTTYPALCVQSLSAYAPSIQ-QSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNGAHVTSNALSLIN 590
            I  +C+ T +P LCV SL  +  S+   S + L    ++++L     A      L  F ++  R   A   C++ + D+VD LS+++  +     AK QD       V TW+SAALT+ +TCT+GF G   +G VK  + A + N + + SN L++ +
Sbjct:   87 ISKACELTRFPELCVDSLMDFPGSLAASSSKDLIHVTVNMTLHHFSHALYSSASL-SFVDMPPRARSAYDSCVELLDDSVDALSRALSSVVS-SSAKPQD-------VTTWLSAALTNHDTCTEGFDG-VDDGGVKDHMTAALQNLSELVSNCLAIFS 234          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.481e-11
Identity = 44/165 (26.67%), Postives = 77/165 (46.67%), Query Frame = 3
Query:  120 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFG------GKALEGKVKSSVRAQVVNGAHVTSNALSLINKF 596
            +R+ C  T YPA CV S+S    S    P  L   +L V ++   S      KL +  +   R   +++ C D   D +D ++ ++  +  +G  K       +  ++TW+SAA+TD +TC D          +     +   +++ +VN    TSN+L++I KF
Sbjct:  271 LRNVCSVTRYPASCVSSISKLPSSNTTDPEALFRLSLQVVINELNSIAGLPKKLAEETD-DERLKSSLSVCGDVFNDAIDIVNDTISTMEEVGDGKKILKSSTIDEIQTWLSAAVTDHDTCLDALDELSQNKTEYANSPISLKLKSAMVNSRKFTSNSLAIIAKF 434          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.526e-11
Identity = 45/159 (28.30%), Postives = 86/159 (54.09%), Query Frame = 3
Query:  120 IRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSF--VTKLRKFRN-LKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGGKALEGKVKSSVRAQVVNGAHVTSNALSLI 587
            ++S+C +T +P LC  ++   +   ++   Q  V  LS++++     +++  V +L K R  L  RE  A+ DCL+ M +T+D L  +V++L      K      H+ +++T +S+A+T++ TC DGF     + KV+  +     +   + SNAL++I
Sbjct:   66 VKSACSNTLHPELCYSAIVNVSDFSKKVTSQKDVIELSLNITVKAVRRNYYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVEDLELYPNKKS--LKEHVEDLKTLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMI 222          
BLAST of CF503967 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.628e-11
Identity = 45/166 (27.11%), Postives = 84/166 (50.60%), Query Frame = 3
Query:  111 TRFIRSSCKSTTYPALCVQSLSAYAPSIQQSPRQLAVTALSVSLSRAQSAKSFVTKLRKFRNLKHREYEAIADCLDEMGDTVDRLSKSVQELNHMGQAKGQDFLWHMSNVETWVSAALTDENTCTDGFGG-KALEGKVKSSVRAQVVNGAHVTSNALSLINKFAGK 605
            T+ I  +C  + YP LC+ +L  +  S+     +L   + + +L +   A  + +    +  +  R   A   CL+ + D+VD L++++  +  +   +        S+V TW+S+A+T+ +TCTDGF   +   G+VK  V   V + + + SN L++   FAGK
Sbjct:   72 TQAISRTCSKSLYPNLCIDTLLDFPGSLTADENELIHISFNATLQKFSKAL-YTSSTITYTQMPPRVRSAYDSCLELLDDSVDALTRALSSVVVVSGDESH------SDVMTWLSSAMTNHDTCTDGFDEIEGQGGEVKDQVIGAVKDLSEMVSNCLAI---FAGK 227          
The following BLAST results are available for this feature:
BLAST of CF503967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
21KD_DAUCA3.152e-5459.3021 kDa protein OS=Daucus carota PE=2 SV=1[more]
PME3_CITSI9.912e-1631.01Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME1_CITSI9.912e-1631.01Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME3_ARATH6.425e-1529.30Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH6.425e-1528.57Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME3_PHAVU3.189e-1431.71Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME34_ARATH1.481e-1131.65Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME26_ARATH1.481e-1126.67Putative pectinesterase/pectinesterase inhibitor 2... [more]
PMEU1_SOLLC2.526e-1128.30Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME61_ARATH5.628e-1127.11Probable pectinesterase/pectinesterase inhibitor 6... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-455 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-11_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF503967 ID=CF503967; Name=CF503967; organism=Citrus sinensis; type=EST; length=650bp
CAGAAAGCTTTTAATTAGTTTCTGAAAACATGGCAAAAACAGGCTGTCTT
TTGCTATTGCTCTCTCTCCTCTACATTATAAGCTTGGTCACAGCTGCCGG
GATTGCTGACACAAGATTTATCAGAAGTTCTTGCAAATCCACAACTTATC
CAGCGCTGTGCGTGCAGTCTCTCTCAGCTTATGCCCCATCAATTCAACAA
AGCCCCCGGCAACTGGCTGTCACAGCCTTGTCCGTGAGCCTCTCCAGGGC
CCAATCCGCAAAGTCATTCGTGACCAAGCTGAGGAAGTTCAGGAACCTGA
AGCACAGAGAGTATGAGGCGATTGCCGACTGCTTGGATGAGATGGGTGAC
ACTGTGGACCGGCTCAGCAAGTCGGTTCAGGAGCTGAACCACATGGGTCA
GGCCAAGGGTCAGGACTTTCTGTGGCACATGAGCAACGTTGAGACATGGG
TTAGTGCTGCTTTGACTGATGAGAACACTTGTACTGATGGGTTCGGTGGC
AAGGCCTTGGAGGGTAAGGTTAAGTCCTCTGTTAGGGCTCAGGTTGTTAA
TGGTGCTCATGTCACTAGCAATGCCCTTTCACTGATCAATAAGTTTGCTG
GGAAACACTGAGCCGTAGTTAACCATATGGCTGTGTGAATGTTTTGCGAG
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