CF503984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF503984 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.298e-16 Identity = 51/136 (37.50%), Postives = 80/136 (58.82%), Query Frame = 2 Query: 140 VDDSISSSVDGTESSSHTGNLTSNMKNMSSTAKSGNSTNVSARKTNSHTQYKPEKWMLPDKKGDRMTQLNLAIVGHVDSGKSTLSGRLLFLLGRITQKQMHKYEKEAKLQGKGSFCLCLGIK*EC*KRERGITMTV 547 ++D+I+SS D E++S + N ++ ++ +ST +K+ Q K L ++G + LNL ++GHVD+GKSTL G +L+LLG I ++ MHKYE+E+K GK SF + +RERG+TM V Sbjct: 199 IEDAIASS-DVLETASKSANPPHTIQ----ASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQL-LNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDV 328
BLAST of CF503984 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.298e-16 Identity = 51/136 (37.50%), Postives = 80/136 (58.82%), Query Frame = 2 Query: 140 VDDSISSSVDGTESSSHTGNLTSNMKNMSSTAKSGNSTNVSARKTNSHTQYKPEKWMLPDKKGDRMTQLNLAIVGHVDSGKSTLSGRLLFLLGRITQKQMHKYEKEAKLQGKGSFCLCLGIK*EC*KRERGITMTV 547 ++D+I+SS D E++S + N ++ ++ +ST +K+ Q K L ++G + LNL ++GHVD+GKSTL G +L+LLG I ++ MHKYE+E+K GK SF + +RERG+TM V Sbjct: 199 IEDAIASS-DVLETASKSANPPHTIQ----ASEEQSSTPAPVKKSGKLRQQIDVKAELEKRQGGKQL-LNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDV 328
BLAST of CF503984 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.541e-15 Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = 2 Query: 131 HGTVDDSISSSVDGTESSSHTGNLTSNMKNMSSTAKSGNSTNVSARKTNSHTQYKPEKWMLPDKKGDRMTQLNLAIVGHVDSGKSTLSGRLLFLLGRITQKQMHKYEKEAKLQGKGSFCLCLGIK*EC*KRERGITMTV 547 H + D S+ SS D ES+S + + ++ ++ +ST +K+ Q K L ++G + LNL ++GHVD+GKSTL G LL+LLG + ++ MHKYE+E+K GK SF + +RERG+TM V Sbjct: 198 HSSEDTSLVSS-DALESASKSALPSHTIQ----ASEEQSSTPTPVKKSGKLRQQIDIKAELEKRQGGKQL-LNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDV 330
BLAST of CF503984 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 7.650e-15 Identity = 44/106 (41.51%), Postives = 63/106 (59.43%), Query Frame = 2 Query: 230 TAKSGNSTNVSARKTNSHTQYKPEKWMLPDKKGDRMTQLNLAIVGHVDSGKSTLSGRLLFLLGRITQKQMHKYEKEAKLQGKGSFCLCLGIK*EC*KRERGITMTV 547 T++ ST RK+ Q K L ++G + LNL ++GHVD+GKSTL G +L+LLG + ++ MHKYE+E+K GK SF + +RERG+TM V Sbjct: 222 TSEELGSTPTPVRKSGKLRQQIDVKAELEKRQGGKQL-LNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDV 326
BLAST of CF503984 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 4.959e-14 Identity = 43/106 (40.57%), Postives = 62/106 (58.49%), Query Frame = 2 Query: 230 TAKSGNSTNVSARKTNSHTQYKPEKWMLPDKKGDRMTQLNLAIVGHVDSGKSTLSGRLLFLLGRITQKQMHKYEKEAKLQGKGSFCLCLGIK*EC*KRERGITMTV 547 T++ T RK+ Q K L ++G + LNL ++GHVD+GKSTL G +L+LLG + ++ MHKYE+E+K GK SF + +RERG+TM V Sbjct: 219 TSEELGCTPTPLRKSGKLRQQIDVKAGLEKRQGGKQL-LNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDV 323
BLAST of CF503984 vs. ExPASy Swiss-Prot
Match: EF1A_CRYPV (Elongation factor 1-alpha OS=Cryptosporidium parvum PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.702e-11 Identity = 33/74 (44.59%), Postives = 48/74 (64.86%), Query Frame = 2 Query: 326 GDRMTQLNLAIVGHVDSGKSTLSGRLLFLLGRITQKQMHKYEKEAKLQGKGSFCLCLGIK*EC*KRERGITMTV 547 G T +NL ++GHVDSGKST +G L++ LG I ++ + K+EKE+ GKGSF + +RERGIT+ + Sbjct: 2 GKEKTHINLVVIGHVDSGKSTTTGHLIYKLGGIDKRTIEKFEKESSEMGKGSFKYAWVLDKLKAERERGITIDI 75
BLAST of CF503984 vs. ExPASy Swiss-Prot
Match: EF1A3_OSCTI (Elongation factor 1-alpha 3 OS=Oscheius tipulae GN=eft-3 PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.702e-11 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 323 KGDRMTQLNLAIVGHVDSGKSTLSGRLLFLLGRITQKQMHKYEKEAKLQGKGSFCLCLGIK*EC*KRERGITMTV 547 KGD+ T +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF + +RERGIT+ + Sbjct: 3 KGDK-THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDI 76 The following BLAST results are available for this feature:
BLAST of CF503984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF503984 ID=CF503984; Name=CF503984; organism=Citrus sinensis; type=EST; length=548bpback to top |