CF504112

Overview
NameCF504112
Unique NameCF504112
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length314
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: PROL_ARATH (Protein PROLIFERA OS=Arabidopsis thaliana GN=PRL PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 4.295e-51
Identity = 99/104 (95.19%), Postives = 102/104 (98.08%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            SLAPEIYGHEDIKKALLLLLVGAPHR+LKDGMKIRGD+HICLMGDPGVAKSQLLKHIINVAPRGVYTTG+GSSGVGLTAAV RD VTNEMVLEGGALVLADMGI
Sbjct:  333 SLAPEIYGHEDIKKALLLLLVGAPHRQLKDGMKIRGDVHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVMRDQVTNEMVLEGGALVLADMGI 436
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM7_SCHPO (DNA replication licensing factor mcm7 OS=Schizosaccharomyces pombe GN=mcm7 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.119e-42
Identity = 85/104 (81.73%), Postives = 94/104 (90.38%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYGHED+KKALLLLLVG   ++L DGM+IRGD++ICL GDPGVAKSQLLK+I  VAPRGVYTTGRGSSGVGLTAAV RD VT+EMVLEGGALVLAD GI
Sbjct:  360 SIAPEIYGHEDVKKALLLLLVGGVTKELGDGMRIRGDINICLTGDPGVAKSQLLKYISKVAPRGVYTTGRGSSGVGLTAAVMRDPVTDEMVLEGGALVLADNGI 463
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: CDC47_YEAST (DNA replication licensing factor CDC47 OS=Saccharomyces cerevisiae GN=CDC47 PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 2.888e-39
Identity = 78/104 (75.00%), Postives = 93/104 (89.42%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYG+ D+KKALLLLLVG   +++ DGMKIRGD+++CLMGDPGVAKSQLLK I  ++PRGVYTTG+GSSGVGLTAAV +D VT+EM+LEGGALVLAD GI
Sbjct:  417 SIAPEIYGNLDVKKALLLLLVGGVDKRVGDGMKIRGDINVCLMGDPGVAKSQLLKAICKISPRGVYTTGKGSSGVGLTAAVMKDPVTDEMILEGGALVLADNGI 520
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM7_MOUSE (DNA replication licensing factor MCM7 OS=Mus musculus GN=Mcm7 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.021e-37
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYGHED+KKALLLLLVG   +    GMKIRG++HICLMGDPGVAKSQLL +I  +APR  YTTGRGSSGVGLTAAV RD+V+ E+ LEGGALVLAD G+
Sbjct:  339 SIAPEIYGHEDVKKALLLLLVGGVDQS-PQGMKIRGNIHICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGV 441
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM7_XENTR (DNA replication licensing factor mcm7 OS=Xenopus tropicalis GN=mcm7 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.288e-36
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYGHED+KKALLLLLVG      + GMKIRG+++ICLMGDPGVAKSQLL +I  +APR  YTTGRGSSGVGLTAAV +D VT EM LEGGALVLAD G+
Sbjct:  338 SIAPEIYGHEDVKKALLLLLVGGVDNSPR-GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVMKDPVTGEMTLEGGALVLADQGV 440
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM7A_XENLA (DNA replication licensing factor mcm7-A OS=Xenopus laevis GN=mcm7-A PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 2.288e-36
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYGHED+KKALLLLLVG      + GMKIRG+++ICLMGDPGVAKSQLL +I  +APR  YTTGRGSSGVGLTAAV +D VT EM LEGGALVLAD G+
Sbjct:  338 SIAPEIYGHEDVKKALLLLLVGGVDNSPR-GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVMKDPVTGEMTLEGGALVLADQGV 440
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM7B_XENLA (DNA replication licensing factor mcm7-B OS=Xenopus laevis GN=mcm7-B PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.988e-36
Identity = 76/104 (73.08%), Postives = 87/104 (83.65%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYGHED+KKALLLLLVG      + GMKIRG++++CLMGDPGVAKSQLL +I  +APR  YTTGRGSSGVGLTAAV +D VT EM LEGGALVLAD G+
Sbjct:  338 SIAPEIYGHEDVKKALLLLLVGGVDHSPR-GMKIRGNINVCLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVMKDPVTGEMTLEGGALVLADQGV 440
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM7_HUMAN (DNA replication licensing factor MCM7 OS=Homo sapiens GN=MCM7 PE=1 SV=4)

HSP 1 Score: 149.828 bits (377), Expect = 3.903e-36
Identity = 76/104 (73.08%), Postives = 89/104 (85.58%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYGHED+KKALLLLLVG   +  + GMKIRG+++ICLMGDPGVAKSQLL +I  +APR  YTTGRGSSGVGLTAAV RD+V+ E+ LEGGALVLAD G+
Sbjct:  339 SIAPEIYGHEDVKKALLLLLVGGVDQSPR-GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGV 441
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM7_BOVIN (DNA replication licensing factor MCM7 OS=Bos taurus GN=MCM7 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.903e-36
Identity = 76/104 (73.08%), Postives = 89/104 (85.58%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+APEIYGHED+KKALLLLLVG   +  + GMKIRG+++ICLMGDPGVAKSQLL +I  +APR  YTTGRGSSGVGLTAAV RD+V+ E+ LEGGALVLAD G+
Sbjct:  339 SIAPEIYGHEDVKKALLLLLVGGVDQSPR-GMKIRGNINICLMGDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGV 441
[Close]
BLAST of CF504112 vs. ExPASy Swiss-Prot
Match: MCM5_YEAST (Minichromosome maintenance protein 5 OS=Saccharomyces cerevisiae GN=MCM5 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.876e-30
Identity = 62/104 (59.62%), Postives = 83/104 (79.81%), Query Frame = 1 
Query:    1 SLAPEIYGHEDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQRDNVTNEMVLEGGALVLADMGI 312
            S+AP I+G+EDIKKA++ LL+G   + L DGM++RGD+++ L+GDPG AKSQLLK +  V+P  VYT+G+GSS  GLTA+VQRD +T E  LEGGA+VLAD G+
Sbjct:  373 SIAPSIFGNEDIKKAIVCLLMGGSKKILPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKGSSAAGLTASVQRDPMTREFYLEGGAMVLADGGV 476
The following BLAST results are available for this feature:
BLAST of CF504112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
PROL_ARATH4.295e-5195.19Protein PROLIFERA OS=Arabidopsis thaliana GN=PRL P... [more]
MCM7_SCHPO8.119e-4281.73DNA replication licensing factor mcm7 OS=Schizosac... [more]
CDC47_YEAST2.888e-3975.00DNA replication licensing factor CDC47 OS=Saccharo... [more]
MCM7_MOUSE6.021e-3774.04DNA replication licensing factor MCM7 OS=Mus muscu... [more]
MCM7_XENTR2.288e-3674.04DNA replication licensing factor mcm7 OS=Xenopus t... [more]
MCM7A_XENLA2.288e-3674.04DNA replication licensing factor mcm7-A OS=Xenopus... [more]
MCM7B_XENLA2.988e-3673.08DNA replication licensing factor mcm7-B OS=Xenopus... [more]
MCM7_HUMAN3.903e-3673.08DNA replication licensing factor MCM7 OS=Homo sapi... [more]
MCM7_BOVIN3.903e-3673.08DNA replication licensing factor MCM7 OS=Bos tauru... [more]
MCM5_YEAST1.876e-3059.62Minichromosome maintenance protein 5 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-600 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504112 ID=CF504112; Name=CF504112; organism=Citrus sinensis; type=EST; length=314bp
TCACTGGCCCCTGAAATTTATGGACATGAAGATATTAAAAAAGCTCTGCT
TCTTCTCCTTGTGGGTGCTCCTCACCGCAAATTAAAGGATGGGATGAAGA
TTAGAGGAGACTTACATATATGTCTGATGGGTGATCCTGGGGTTGCCAAA
AGTCAGCTTCTCAAGCACATTATCAATGTAGCGCCCAGGGGGGTGTATAC
CACTGGAAGAGGTAGCAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAGAG
ATAATGTGACAAATGAGATGGTTCTGGAAGGAGGAGCATTGGTGCTAGCA
GATATGGGTATTTG
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