CF504122

Overview
NameCF504122
Unique NameCF504122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length381
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT2_HUMAN (Glutathione S-transferase theta-2 OS=Homo sapiens GN=GSTT2 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 1.517e-19
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARIH 381
            M L+++ D +SQPSRAV IF K NG+  E   V L K +  S EF +IN + K+P + DG   L ES AILIYL+C +    DHWYP+DL  RAR+H
Sbjct:    1 MGLELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQ-TPDHWYPSDLQARARVH 96          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT2_RAT (Glutathione S-transferase theta-2 OS=Rattus norvegicus GN=Gstt2 PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 1.981e-19
Identity = 48/97 (49.48%), Postives = 64/97 (65.98%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARIH 381
            M L++Y D +SQPSRAV IF K NG+ F+   V L K +  S +F ++N + KVP + DG   L ES AILIYL+  +  +ADHWYP DL  RA++H
Sbjct:    1 MGLELYLDLLSQPSRAVYIFAKKNGIPFQLRTVDLLKGQHLSEQFSQVNCLKKVPVLKDGSFVLTESTAILIYLSSKYQ-VADHWYPADLQARAQVH 96          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT2_MOUSE (Glutathione S-transferase theta-2 OS=Mus musculus GN=Gstt2 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 2.587e-19
Identity = 47/97 (48.45%), Postives = 64/97 (65.98%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARIH 381
            M L++Y D +SQPSRAV IF K NG+ F+   V + K +  S +F ++N + KVP + DG   L ES AILIYL+  +  +ADHWYP DL  RA++H
Sbjct:    1 MGLELYLDLLSQPSRAVYIFAKKNGIPFQTRTVDILKGQHMSEQFSQVNCLNKVPVLKDGSFVLTESTAILIYLSSKYQ-VADHWYPADLQARAQVH 96          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT1_MOUSE (Glutathione S-transferase theta-1 OS=Mus musculus GN=Gstt1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 3.379e-19
Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +SQP RA+ IF K N + F+   V L K E  S  F  +NPM KVPA++DG   L ES AIL+YLA  +  + DHWYP DL  RAR+
Sbjct:    1 MVLELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFARVNPMKKVPAMMDGGFTLCESVAILLYLAHKYK-VPDHWYPQDLQARARV 95          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT1_RAT (Glutathione S-transferase theta-1 OS=Rattus norvegicus GN=Gstt1 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 4.414e-19
Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +SQP RA+ IF K N + F+   V L K E  S  F ++NPM KVPA+ DG   L ES AIL+YLA  +  + DHWYP DL  RAR+
Sbjct:    1 MVLELYLDLLSQPCRAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCESVAILLYLAHKYK-VPDHWYPQDLQARARV 95          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT1_HUMAN (Glutathione S-transferase theta-1 OS=Homo sapiens GN=GSTT1 PE=1 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 4.131e-17
Identity = 46/96 (47.92%), Postives = 60/96 (62.50%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +SQP RAV IF K N + FE   V L K +  S  F ++NP+ KVPA+ DG   L ES AIL+YL   +  + D+WYP DL  RAR+
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGQHLSDAFAQVNPLKKVPALKDGDFTLTESVAILLYLTRKYK-VPDYWYPQDLQARARV 95          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT1_BOVIN (Glutathione S-transferase theta-1 OS=Bos taurus GN=GSTT1 PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 1.570e-16
Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +SQP RA+ IF K N + FE   V L K +  S  F ++NP+ KVP + DG   L ES AIL+YLA  +  + DHWYP DL   AR+
Sbjct:    1 MGLELYLDLLSQPCRAIYIFAKKNRIPFELRTVDLRKGQHLSDAFAQVNPLQKVPILKDGDFILTESVAILLYLARKYK-VPDHWYPQDLQACARV 95          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT4_RAT (Glutathione S-transferase theta-4 OS=Rattus norvegicus GN=Gstt4 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.678e-16
Identity = 46/96 (47.92%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +S P RAV IF + NG+ F+   V L K   +S E+ EINP+ KVP++ DG+  L ES AIL YL C       HWYP DL  RAR+
Sbjct:    1 MGLELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKVPSLRDGKFILSESVAILCYL-CRKYSAPSHWYPPDLHMRARV 95          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT4_MOUSE (Glutathione S-transferase theta-4 OS=Mus musculus GN=Gstt4 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.497e-16
Identity = 45/96 (46.88%), Postives = 59/96 (61.46%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +S P RAV IF + NG+ F+   V L K   +S E+ EINP+ K+P++ DG+  L ES AIL YL C       HWYP DL  RAR+
Sbjct:    1 MGLELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKLPSLKDGKFILSESVAILFYL-CRKYSAPSHWYPPDLHMRARV 95          
BLAST of CF504122 vs. ExPASy Swiss-Prot
Match: GSTT4_HUMAN (Glutathione S-transferase theta-4 OS=Homo sapiens GN=GSTT4 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 2.267e-15
Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 1
Query:   91 MKLKVYADRMSQPSRAVIIFCKVNGLDFEEIEVRLAKREQYSPEFKEINPMAKVPAIVDGRLKLFESHAILIYLACAFPGIADHWYPNDLSKRARI 378
            M L++Y D +SQP RAV IF K N + FE   V L K   +S E+ +INP+ K+P++ DG+  L ES AIL YL C       HW P DL  RAR+
Sbjct:    1 MGLELYLDLLSQPCRAVYIFAKKNDIPFELRIVDLIKGHHHSKEYIDINPLRKLPSLKDGKFILSESAAILYYL-CRKYSAPSHWCPPDLHARARV 95          
The following BLAST results are available for this feature:
BLAST of CF504122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
GSTT2_HUMAN1.517e-1950.52Glutathione S-transferase theta-2 OS=Homo sapiens ... [more]
GSTT2_RAT1.981e-1949.48Glutathione S-transferase theta-2 OS=Rattus norveg... [more]
GSTT2_MOUSE2.587e-1948.45Glutathione S-transferase theta-2 OS=Mus musculus ... [more]
GSTT1_MOUSE3.379e-1950.00Glutathione S-transferase theta-1 OS=Mus musculus ... [more]
GSTT1_RAT4.414e-1950.00Glutathione S-transferase theta-1 OS=Rattus norveg... [more]
GSTT1_HUMAN4.131e-1747.92Glutathione S-transferase theta-1 OS=Homo sapiens ... [more]
GSTT1_BOVIN1.570e-1646.88Glutathione S-transferase theta-1 OS=Bos taurus GN... [more]
GSTT4_RAT2.678e-1647.92Glutathione S-transferase theta-4 OS=Rattus norveg... [more]
GSTT4_MOUSE3.497e-1646.88Glutathione S-transferase theta-4 OS=Mus musculus ... [more]
GSTT4_HUMAN2.267e-1546.88Glutathione S-transferase theta-4 OS=Homo sapiens ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-610 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-14_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504122 ID=CF504122; Name=CF504122; organism=Citrus sinensis; type=EST; length=381bp
GCTGACGATTGAAACCGAGTGTCGCAAACGCTCACCAGTCACCAGCAAGC
AGAAGCAGGCACTGAGAGTGGGTGGGCTAAAGAAAGGAAAATGAAGCTGA
AAGTATATGCAGATCGGATGTCACAGCCATCTCGCGCTGTCATCATCTTT
TGCAAGGTAAATGGATTAGACTTCGAGGAGATTGAAGTTAGGTTAGCAAA
GCGTGAACAATACTCTCCTGAATTCAAAGAAATAAACCCTATGGCAAAAG
TGCCTGCTATTGTTGATGGGAGATTGAAGCTGTTTGAGAGTCATGCAATT
CTTATCTATCTTGCTTGTGCATTTCCTGGAATAGCAGATCATTGGTATCC
CAATGACCTTTCGAAGAGAGCCAGGATTCAC
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