CF504262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2_ARATH (Stromal cell-derived factor 2-like protein OS=Arabidopsis thaliana GN=At2g25110 PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 1.353e-61 Identity = 102/131 (77.86%), Postives = 119/131 (90.84%), Query Frame = 2 Query: 2 KPILGASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTES 394 KP+ G + KQGD +KSG IRLQHM+TRKWLHSHLHASPISGNLE+SCFG + SDTGD+W+++IEGSGKTW+QDQR+RLQH+DT GYLHSH KKYQRIAGGQQEVCG+REK+ADN+WLAAEGVYLP+ ES Sbjct: 86 KPVPGTTEKQGDAVKSGATIRLQHMKTRKWLHSHLHASPISGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQEVCGIREKKADNIWLAAEGVYLPLNES 216
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2_DICDI (Stromal cell-derived factor 2-like protein OS=Dictyostelium discoideum GN=DDB_G0284847 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 9.480e-23 Identity = 56/122 (45.90%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 14 GASAKQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHS-HPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVY 376 G QG +K+G IIRL H T+K LHSHL SP++ E+SCFG E DTGD W V E SGK W + Q +R +H DT YL + KYQ GQ E+ G + K D W EG+Y Sbjct: 88 GNRVLQGTVVKNGDIIRLVHSNTKKNLHSHLAVSPLTKQNEVSCFGENGEGDTGDNWIVETE-SGKEWMRGQVVRFKHADTKTYLQAIESAKYQNPIPGQIEISGGKSKNEDTKWRTEEGIY 208
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2_MOUSE (Stromal cell-derived factor 2 OS=Mus musculus GN=Sdf2 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.183e-18 Identity = 48/122 (39.34%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 26 KQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE 391 ++G IK G IRL H+ T + LHSH SP+SGN E+S FG E E D D W V+ +G W +D +R +H T L ++Y R GQ+EV G+ + +N W A EG+++ +E Sbjct: 81 ERGTPIKCGQPIRLTHINTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDDWTVLC--NGPYWVRDGEVRFKHSSTDVLLSVTGEQYGRPISGQKEVHGMAQPSQNNYWKAMEGIFMKPSE 200
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2_HUMAN (Stromal cell-derived factor 2 OS=Homo sapiens GN=SDF2 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 9.183e-18 Identity = 52/131 (39.69%), Postives = 73/131 (55.73%), Query Frame = 2 Query: 8 ILGASA---KQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE 391 I G SA ++G IK G IRL H+ T + LHSH SP+SGN E+S FG E E D D W V+ +G W +D +R +H T L ++Y R GQ+EV G+ + +N W A EG+++ +E Sbjct: 72 IRGKSATVCERGTPIKCGQPIRLTHVNTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDDWTVLC--NGPYWVRDGEVRFKHSSTEVLLSVTGEQYGRPISGQKEVHGMAQPSQNNYWKAMEGIFMKPSE 200
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2_BOVIN (Stromal cell-derived factor 2 OS=Bos taurus GN=SDF2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.672e-17 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 26 KQGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTE 391 ++G I+ G IRL H+ T + LHSH SP+SGN E+S FG E E D D W V+ +G W +D +R +H T L ++Y R GQ+EV G+ + +N W A EG+++ +E Sbjct: 81 ERGTPIRCGQPIRLTHVNTGRNLHSHHFTSPLSGNQEVSAFGEEGEGDYLDDWTVLC--NGPYWVRDGEVRFKHSSTEVLLSVTGEQYGRPISGQKEVHGMAQPSQNNYWKAMEGIFMKPSE 200
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2L_MOUSE (Stromal cell-derived factor 2-like protein 1 OS=Mus musculus GN=Sdf2l1 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.326e-16 Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 29 QGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVYL 379 +G ++ G +RL H+ T K LH+H SP+S N E+S FG + E D D W V SG+ W ++ +R QHV T +L ++Y GQ EV G+ A N W A EG+++ Sbjct: 94 RGLPVRCGQAVRLTHVLTGKNLHTHHFPSPLSNNQEVSAFGEDGEGDDLDLWTVRC--SGQHWEREASVRFQHVGTSVFLSVTGEQYGNPIRGQHEVHGMPSANAHNTWKAMEGIFI 208
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2L_HUMAN (Stromal cell-derived factor 2-like protein 1 OS=Homo sapiens GN=SDF2L1 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.732e-16 Identity = 43/117 (36.75%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 29 QGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVYL 379 +G ++ G +RL H+ T K LH+H SP+S N E+S FG + E D D W V SG+ W ++ +R QHV T +L ++Y GQ EV G+ N W A EG+++ Sbjct: 94 RGSPVRCGQAVRLTHVLTGKNLHTHHFPSPLSNNQEVSAFGEDGEGDDLDLWTVRC--SGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEVHGMPSANTHNTWKAMEGIFI 208
BLAST of CF504262 vs. ExPASy Swiss-Prot
Match: SDF2L_BOVIN (Stromal cell-derived factor 2-like protein 1 OS=Bos taurus GN=SDF2L1 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.262e-16 Identity = 43/117 (36.75%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 29 QGDTIKSGTIIRLQHMRTRKWLHSHLHASPISGNLEISCFGGEEESDTGDYWRVMIEGSGKTWRQDQRIRLQHVDTGGYLHSHPKKYQRIAGGQQEVCGVREKRADNVWLAAEGVYL 379 +G ++ G +RL H+ T K LH+H SP++ N E+S FG + E D D W V SG+ W ++ +R QHV T +L ++Y GQ EV G+ A N W A EG+++ Sbjct: 94 RGSPVRCGQAVRLTHVLTGKNLHTHHFPSPLTNNQEVSAFGEDGEGDDLDLWTVRC--SGQHWEREAAVRFQHVGTSVFLSVTGEQYGSPIRGQHEVHGMASASAHNKWKAMEGIFI 208 The following BLAST results are available for this feature:
BLAST of CF504262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504262 ID=CF504262; Name=CF504262; organism=Citrus sinensis; type=EST; length=483bpback to top |