CF504327

Overview
NameCF504327
Unique NameCF504327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length486
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504327 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.088e-21
Identity = 54/154 (35.06%), Postives = 87/154 (56.49%), Query Frame = 1
Query:   10 LILALASNSLLVLGTSSVPEPLLDVNGNKVESTLQYYIVSAIWXXXXXXXXXXXXXXXYCPLDVIQLPSDTQNGIKLTLSPYNNST-IVRESTDLNLRFSVLLSGRD-YCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIG 465
            L+ A  S S      ++   P+LD +G+++++ +QYY++S+I                 CP  V+Q  SD  NG  +  S  ++   +VR STD+N+ F  +   RD  C+   +W++DNYD ++GKW++TT G+ G PG  TL +WFK+EK G
Sbjct:   10 LLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPI---RDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG 160          
BLAST of CF504327 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19
Identity = 52/152 (34.21%), Postives = 80/152 (52.63%), Query Frame = 1
Query:   13 ILALASNSLLVLGTSSVPEPLLDVNGNKVESTLQYYIVSAI--WXXXXXXXXXXXXXXXYCPLDVIQLPSDTQNGIKLTLSPYN-NSTIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEK 459
            +LA A+N LL     S P P+LD++G K+ +   YYIV  +                   CP  V+Q   +  +   L   P N    +VR STDLN+ FS  +  R       +W++D YD ++G++F+T GG+ G+PG ET+ +WFK+E+
Sbjct:   17 LLAAAANPLLS-AADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCR--WTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE 165          
BLAST of CF504327 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16
Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = 1
Query:   64 PEPLLDVNGNKVESTLQYYIVSAIWXXXXXXXXXXXXXXXY-CPLDVIQLPSDTQNGIKLTLSPYNN--STIVRESTDLNLRFSVLLSGRDYCNEQPLWKVDNYDAASGKWFITTGGLDGHPGAETLLNWFKLEKIGNFPGTYK 486
            P+P++D++G  V   + Y++VSAIW                 CPL V+Q P D  NG  +  S   N    IV ES DLN++F++ ++    CNE   WKVD +    G W +T GG  G+ G E+  + FK++K G  P +YK
Sbjct:    3 PKPIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFD--NGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN----CNETTAWKVDRFPGVIG-WTVTLGGEKGYHGFESTHSMFKIKKAG-LPFSYK 138          
The following BLAST results are available for this feature:
BLAST of CF504327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
ASP_THECC1.088e-2135.0621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU8.625e-1934.21Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA6.834e-1636.11Latex serine proteinase inhibitor OS=Carica papaya... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-816 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504327 ID=CF504327; Name=CF504327; organism=Citrus sinensis; type=EST; length=486bp
CTCTCTTTCCTTATCCTTGCCTTGGCCTCAAACTCTTTGTTGGTCTTGGG
CACCTCATCAGTTCCTGAACCTCTCCTTGATGTCAACGGCAACAAGGTCG
AATCCACCCTTCAGTACTACATAGTCTCAGCCATCTGGGGAGCTGGCGGT
GGTGGAGTTAGCCTACACGGTGGCAGAAACGGATATTGTCCGCTGGACGT
TATCCAATTACCTTCTGATACGCAAAATGGAATCAAATTAACACTGTCAC
CGTATAACAATTCTACAATTGTCCGAGAATCCACTGATCTCAACTTGAGA
TTCTCAGTGTTGCTATCTGGACGTGACTATTGTAACGAACAACCGTTGTG
GAAAGTTGATAATTATGACGCGGCATCAGGCAAATGGTTTATAACAACCG
GGGGACTTGATGGTCACCCTGGAGCTGAAACTTTGCTAAATTGGTTTAAG
CTTGAGAAAATTGGAAATTTTCCAGGTACATACAAA
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