CF504382
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY121_ARATH (Syntaxin-121 OS=Arabidopsis thaliana GN=SYP121 PE=1 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 3.601e-64 Identity = 120/144 (83.33%), Postives = 135/144 (93.75%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAR 434 TRTSV+NGLRKKL DSM+SFN LR+ ISSEYR+TVQRRY+TVTGENPDE+TLDRLISTGESE FLQKAIQEQGRGR+LDTINEIQERHDAVK +EKNL+ELHQVFLDMAVLV+ QG QLDDIES V RA+S++RGGT++LQTAR Sbjct: 134 TRTSVLNGLRKKLMDSMDSFNRLRELISSEYRETVQRRYFTVTGENPDERTLDRLISTGESERFLQKAIQEQGRGRVLDTINEIQERHDAVKDIEKNLRELHQVFLDMAVLVEHQGAQLDDIESHVGRASSFIRGGTDQLQTAR 277 HSP 2 Score: 24.2534 bits (51), Expect = 3.601e-64 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 439 YQLSTRKWTC 468 YQ +TRKWTC Sbjct: 279 YQKNTRKWTC 288
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY122_ARATH (Syntaxin-122 OS=Arabidopsis thaliana GN=SYP122 PE=1 SV=1) HSP 1 Score: 213.001 bits (541), Expect = 7.117e-56 Identity = 109/143 (76.22%), Postives = 123/143 (86.01%), Query Frame = 3 Query: 6 RTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAR 434 RTSVVNGLRKKLKD ME F+ +R+ I++EY++TV R +TVTGE PDE TL+RLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVK +EK+L ELHQVFLDMAVLV+ QG QLDDIE V+RANS VR G +RL AR Sbjct: 134 RTSVVNGLRKKLKDEMEKFSRVRETITNEYKETVGRMCFTVTGEYPDEATLERLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKDIEKSLNELHQVFLDMAVLVEHQGAQLDDIEGNVKRANSLVRSGADRLVKAR 276 HSP 2 Score: 24.2534 bits (51), Expect = 7.117e-56 Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1 Query: 439 YQLSTRKWTC 468 YQ +TRKWTC Sbjct: 278 YQKNTRKWTC 287
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY124_ARATH (Syntaxin-124 OS=Arabidopsis thaliana GN=SYP124 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 3.140e-54 Identity = 105/156 (67.31%), Postives = 131/156 (83.97%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAKYPKMDLY 470 TRTSVV+GL KKLKD M+SF LR R+++EY++TV+RRY+T+TGE DE+T++ LIS+GESE FLQKAIQEQGRG+ILDTI+EIQERHDAVK +EKNL ELHQVFLDMA LV++QG+QL+DIES V +A+S+VR GT++LQ ARE K Y Sbjct: 123 TRTSVVSGLGKKLKDLMDSFQGLRARMNAEYKETVERRYFTITGEQADEQTIENLISSGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNDIESHVSKASSFVRRGTDQLQDAREYQKSSRKWTCY 278
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY125_ARATH (Syntaxin-125 OS=Arabidopsis thaliana GN=SYP125 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 1.193e-53 Identity = 104/156 (66.67%), Postives = 131/156 (83.97%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAKYPKMDLY 470 TR+SVV+GL KKLKD M+SF LR R+++EY++TV+RRY+T+TGE DE+T+D LI++GESE FLQKAIQEQGRG+ILDTI+EIQERHDAVK +EKNL ELHQVFLDMA LV+AQG+QL++IES V +A+S+VR GT++LQ ARE K Y Sbjct: 118 TRSSVVSGLGKKLKDLMDSFQGLRARMNNEYKETVERRYFTITGEKADEQTIDNLIASGESENFLQKAIQEQGRGQILDTISEIQERHDAVKEIEKNLLELHQVFLDMAALVEAQGQQLNNIESHVAKASSFVRRGTDQLQDAREYQKSSRKWTCY 273
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY123_ARATH (Syntaxin-123 OS=Arabidopsis thaliana GN=SYP123 PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.510e-48 Identity = 91/144 (63.19%), Postives = 123/144 (85.42%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAR 434 TRTSVV+GL KKLKD M+ F LR ++++EY++TV+RRY+TVTG+ DE+T+++LIS+GESE FLQKAIQEQGRG+++DT++EIQERHD VK +E++L ELHQVFLDMA LV+AQG L+DIES V +A+S+V GT++L A+ Sbjct: 126 TRTSVVSGLGKKLKDMMDDFQRLRTKMATEYKETVERRYFTVTGQKADEETVEKLISSGESERFLQKAIQEQGRGQVMDTLSEIQERHDTVKEIERSLLELHQVFLDMAALVEAQGNMLNDIESNVSKASSFVMRGTDQLHGAK 269
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY132_ARATH (Syntaxin-132 OS=Arabidopsis thaliana GN=SYP132 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.556e-43 Identity = 88/146 (60.27%), Postives = 105/146 (71.92%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREV 440 +RT+ L+KKLKD M F LR+ I EYRD V RR YTVTGE DE T+D LI TG SE QKAIQEQGRG+++DT+ EIQERHDAV+ LEK L +L Q+FLDMAVLV AQGE LD+IESQV A +V+ G LQ A+ + Sbjct: 124 SRTATTLSLKKKLKDKMAEFQVLRENIQQEYRDVVDRRVYTVTGERADEDTIDELIETGNSEQIFQKAIQEQGRGQVMDTLAEIQERHDAVRDLEKKLLDLQQIFLDMAVLVDAQGEMLDNIESQVSSAVDHVQSGNTALQRAKSL 269
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY131_ARATH (Putative syntaxin-131 OS=Arabidopsis thaliana GN=SYP131 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.581e-40 Identity = 82/143 (57.34%), Postives = 104/143 (72.73%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTA 431 TRT+ ++KK KD + F LRQ I EYR+ V+RR +TVTG+ DE+ +DRLI TG+SE QKAI+EQGRG+I+DT+ EIQERHDAV+ LEK L +L QVFLDMAVLV AQGE LD+IE+ V A +V+ G +L A Sbjct: 125 TRTATTIAVKKKFKDKISEFQTLRQNIQQEYREVVERRVFTVTGQRADEEAIDRLIETGDSEQIFQKAIREQGRGQIMDTLAEIQERHDAVRDLEKKLLDLQQVFLDMAVLVDAQGEMLDNIENMVSSAVDHVQSGNNQLTKA 267
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY111_ARATH (Syntaxin-related protein KNOLLE OS=Arabidopsis thaliana GN=KN PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 9.808e-40 Identity = 78/145 (53.79%), Postives = 114/145 (78.62%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGES-ETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAR 434 +RT+V NGLRKKLK+ M F LRQ++ SEY++TV+RRY+TVTGE+ +++ ++++I+ E FL +AIQE G+G++L+T+ EIQ+R+DA K +EK+L ELHQVFLDMAV+V++QGEQ+D+IE V A+ YV G L+TA+ Sbjct: 131 SRTAVTNGLRKKLKEVMMEFQGLRQKMMSEYKETVERRYFTVTGEHANDEMIEKIITDNAGGEEFLTRAIQEHGKGKVLETVVEIQDRYDAAKEIEKSLLELHQVFLDMAVMVESQGEQMDEIEHHVINASHYVADGANELKTAK 275
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: SY112_ARATH (Syntaxin-112 OS=Arabidopsis thaliana GN=SYP112 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 5.394e-30 Identity = 64/149 (42.95%), Postives = 101/149 (67.79%), Query Frame = 3 Query: 3 TRTSVVNGLRKKLKDSMESFNELRQRISSEYRDTVQRRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAK 449 TRTS+ NG+RKKL+D+M F+ LR+RI ++YR+ ++R+Y+ TGE P + ++++IS S + L K + + + + +ERH+AV ++++L LHQVFLDMAVLV+ QG+++DDIE+ V A S+V GGT L A ++ K Sbjct: 135 TRTSITNGVRKKLRDTMSEFHRLRERIFADYREDLKRKYFLATGEEPSNEDMEKMISGSGSCSDLVKTFEVKPEMDL-----KTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGDRIDDIEANVANAGSFVSGGTNSLYYANQMKKK 278
BLAST of CF504382 vs. ExPASy Swiss-Prot
Match: STX1A_DROME (Syntaxin-1A OS=Drosophila melanogaster GN=Syx1A PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.753e-15 Identity = 45/144 (31.25%), Postives = 81/144 (56.25%), Query Frame = 3 Query: 27 LRKKLKDSMESFNELRQRISSEYRDTVQ---RRYYTVTGENPDEKTLDRLISTGESETFLQKAIQEQGRGRILDTINEIQERHDAVKVLEKNLQELHQVFLDMAVLVQAQGEQLDDIESQVQRANSYVRGGTERLQTAREVSAK 449 L +K + M +N R ++YR+ + +R +TG ++ L++++ G S F Q I E + + T+ +I+ RH + LE +++ELH +F+DMA+LV++QGE +D IE V+ A YV+ T+ + A + +K Sbjct: 126 LSRKFVEVMTEYN----RTQTDYRERCKGRIQRQLEITGRPTNDDELEKMLEEGNSSVFTQGIIMETQQAK--QTLADIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQSK 263 The following BLAST results are available for this feature:
BLAST of CF504382 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504382 ID=CF504382; Name=CF504382; organism=Citrus sinensis; type=EST; length=509bpback to top |