CF504401

Overview
NameCF504401
Unique NameCF504401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length334
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2196 contig Csv1_Contig2196:552..885. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF504401 vs. ExPASy Swiss-Prot
Match: LGT_CITUN (Limonoid UDP-glucosyltransferase OS=Citrus unshiu PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 1.595e-61
Identity = 108/110 (98.18%), Postives = 109/110 (99.09%), Query Frame = 3 
Query:    3 YFHGLVPFPSEKEPEIDVQLPCMPLLKHDEVPSFLHPSTPYPFLRRAILGQYENLGKPFCILLDTFYELEKEIIDYMAKIWPIKPVGPLFKNPKAPTLTVRDDCMKPDEC 332
            YFHGLVPFPSEKEPEIDVQLPCMPLLKHDE+PSFLHPSTPYPFLRRAILGQYENLGKPFCILLDTFYELEKEIIDYMAKI PIKPVGPLFKNPKAPTLTVRDDCMKPDEC
Sbjct:  155 YFHGLVPFPSEKEPEIDVQLPCMPLLKHDEMPSFLHPSTPYPFLRRAILGQYENLGKPFCILLDTFYELEKEIIDYMAKICPIKPVGPLFKNPKAPTLTVRDDCMKPDEC 264
The following BLAST results are available for this feature:
BLAST of CF504401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LGT_CITUN1.595e-6198.18Limonoid UDP-glucosyltransferase OS=Citrus unshiu ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-890 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_H08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504401 ID=CF504401; Name=CF504401; organism=Citrus sinensis; type=EST; length=334bp
ATTACTTCCACGGTTTGGTTCCATTTCCTAGTGAAAAGGAACCCGAAATT
GATGTTCAGTTGCCGTGCATGCCACTACTGAAGCATGATGAAGTGCCTAG
CTTCTTGCATCCGTCAACTCCTTATCCTTTCTTGAGAAGAGCTATTTTGG
GGCAGTACGAAAATCTTGGCAAGCCGTTTTGCATATTGTTGGACACTTTC
TATGAGCTTGAGAAAGAGATTATCGATTACATGGCAAAAATCTGGCCTAT
TAAACCCGTCGGCCCTCTGTTCAAAAACCCTAAAGCTCCAACCTTAACCG
TCCGCGATGACTGCATGAAACCCGATGAATGCAT
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