CF504427

Overview
NameCF504427
Unique NameCF504427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length294
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BEL1_ARATH (Homeobox protein BEL1 homolog OS=Arabidopsis thaliana GN=BEL1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 5.388e-33
Identity = 63/101 (62.38%), Postives = 86/101 (85.15%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPVAPGTS---RGETPRLKIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWL 294
            G G A +Y+ALAS+AMSRHFRCL+DG+VGQIQAT +A+GE++      S   RGETPRL+++DQ LRQQ++++QM+++++HPWRPQRGLPER+V+ LRAWL
Sbjct:  310 GLGGAEIYTALASRAMSRHFRCLKDGLVGQIQATSQALGEREEDNRAVSIAARGETPRLRLLDQALRQQKSYRQMTLVDAHPWRPQRGLPERAVTTLRAWL 410          
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 5.219e-28
Identity = 58/101 (57.43%), Postives = 77/101 (76.24%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPV---APGTSRGETPRLKIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWL 294
            G GAA  Y+ LA KAMSRHFRCL+D V  Q++ + + +G+K+     + G ++GETPRL++++Q+LRQQRAF  M MME   WRPQRGLPERSV++LRAWL
Sbjct:  343 GYGAAVPYTTLAQKAMSRHFRCLKDAVAVQLKRSCELLGDKEAAGAASSGLTKGETPRLRLLEQSLRQQRAFHHMGMMEQEAWRPQRGLPERSVNILRAWL 443          
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.902e-28
Identity = 59/101 (58.42%), Postives = 78/101 (77.23%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPV---APGTSRGETPRLKIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWL 294
            G+GAA  Y+ALA KAMSRHFRCL+D V  Q++ + + +G+KD     + G ++GETPRL++++Q+LRQ RAF QM  ME   WRPQRGLPERSV++LRAWL
Sbjct:  417 GHGAALPYTALAQKAMSRHFRCLKDAVAAQLKQSCELLGDKDAAGISSSGLTKGETPRLRLLEQSLRQNRAFHQMG-MEQEAWRPQRGLPERSVNILRAWL 516          
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BLH1_ARATH (BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.401e-25
Identity = 58/102 (56.86%), Postives = 76/102 (74.51%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPVAPGTSRGETPRLKIIDQTLRQQRAFQQMSMMESHP----WRPQRGLPERSVSVLRAWL 294
            G G+A+ Y++LA K +SR FRCL++ + GQI+A  K++GE+D V+ G  R E  RLK +D  LRQQRA QQ+ M++ HP    WRPQRGLPER+VSVLRAWL
Sbjct:  305 GIGSAKSYTSLALKTISRQFRCLKEAIAGQIKAANKSLGEEDSVS-GVGRFEGSRLKFVDHHLRQQRALQQLGMIQ-HPSNNAWRPQRGLPERAVSVLRAWL 404          
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BLH7_ARATH (BEL1-like homeodomain protein 7 OS=Arabidopsis thaliana GN=BLH7 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 5.055e-23
Identity = 52/98 (53.06%), Postives = 71/98 (72.45%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPVAPGTSRGETPRLKIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWL 294
            G GAA+ Y+ALA + +SRHFRCLRD + GQI   +K++G +   + G   G + RL+ +DQ +RQQRA Q++ +M+ H WRPQRGLP+ SV VLRAWL
Sbjct:  208 GCGAAKPYTALALQTISRHFRCLRDAISGQILVIRKSLGGEQDGSDGRGVGIS-RLRNVDQQVRQQRALQRLGVMQPHTWRPQRGLPDSSVLVLRAWL 304          
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BLH6_ARATH (BEL1-like homeodomain protein 6 OS=Arabidopsis thaliana GN=BLH6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.623e-21
Identity = 52/98 (53.06%), Postives = 64/98 (65.31%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPVAPGTSRGETPRLKIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWL 294
            G GAA+ Y+ALA + +SRHFR LRD + GQI   +K +GE+   + G   G   RLK +DQ LRQQR F     M+   WRPQRGLPE SV +LRAWL
Sbjct:  241 GYGAAKPYTALALQTISRHFRSLRDAISGQILVLRKCLGEQQDGSDGKRVGIISRLKYVDQHLRQQRGF-----MQPQAWRPQRGLPENSVLILRAWL 333          
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BLH3_ARATH (BEL1-like homeodomain protein 3 OS=Arabidopsis thaliana GN=BLH3 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.179e-21
Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPVAPGTSRGET-PRLKIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWL 294
            G GAA+ Y+++A   +SRHFRCLRD +  QIQ  +  +GE++       +GE  PRL+ +DQ LRQQRA  Q   M    WRPQRGLPE SVS+LRAWL
Sbjct:  270 GLGAAKPYTSVALNRISRHFRCLRDAIKEQIQVIRGKLGERET---SDEQGERIPRLRYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSILRAWL 365          
BLAST of CF504427 vs. ExPASy Swiss-Prot
Match: BLH10_ARATH (BEL1-like homeodomain protein 10 OS=Arabidopsis thaliana GN=BLH10 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.179e-21
Identity = 52/99 (52.53%), Postives = 66/99 (66.67%), Query Frame = 1
Query:    1 GNGAARVYSALASKAMSRHFRCLRDGVVGQIQATKKAMGEKDPVAPGTSRGET-PRLKIIDQTLRQQRAFQQMSMMESHPWRPQRGLPERSVSVLRAWL 294
            G G+A+ Y+++A   +SRHFR LRD +  QIQ  ++ +GEK   +    +GE  PRL+ +DQ LRQQRA  Q   M    WRPQRGLPE SVSVLRAWL
Sbjct:  272 GLGSAKPYTSVALNRISRHFRALRDAIKEQIQIVREKLGEKGGESLDEQQGERIPRLRYLDQRLRQQRALHQQLGMVRPAWRPQRGLPENSVSVLRAWL 370          
The following BLAST results are available for this feature:
BLAST of CF504427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
BEL1_ARATH5.388e-3362.38Homeobox protein BEL1 homolog OS=Arabidopsis thali... [more]
BLH4_ARATH5.219e-2857.43BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BLH2_ARATH8.902e-2858.42BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]
BLH1_ARATH5.401e-2556.86BEL1-like homeodomain protein 1 OS=Arabidopsis tha... [more]
BLH7_ARATH5.055e-2353.06BEL1-like homeodomain protein 7 OS=Arabidopsis tha... [more]
BLH6_ARATH3.623e-2153.06BEL1-like homeodomain protein 6 OS=Arabidopsis tha... [more]
BLH3_ARATH6.179e-2152.53BEL1-like homeodomain protein 3 OS=Arabidopsis tha... [more]
BLH10_ARATH6.179e-2152.53BEL1-like homeodomain protein 10 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-916 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504427 ID=CF504427; Name=CF504427; organism=Citrus sinensis; type=EST; length=294bp
GGTAACGGGGCGGCAAGGGTATATTCAGCTTTGGCTTCCAAGGCCATGTC
AAGGCATTTTAGATGTTTAAGAGATGGGGTTGTTGGTCAAATTCAGGCTA
CAAAGAAAGCCATGGGCGAGAAAGATCCCGTTGCACCGGGCACAAGCAGA
GGCGAAACACCAAGACTCAAAATCATTGATCAAACCTTGAGACAACAACG
AGCTTTTCAGCAGATGAGCATGATGGAGAGTCACCCGTGGAGACCTCAAA
GGGGCCTGCCTGAAAGATCCGTATCCGTGCTTCGTGCTTGGTTG
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