CF504447

Overview
NameCF504447
Unique NameCF504447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length379
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig802 contig Csv1_Contig802:593..971. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 3.146e-49
Identity = 86/123 (69.92%), Postives = 98/123 (79.67%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M NH+++ M  ILE+YKGF  +  LVDVGG +G TL+ I SKYP +KGINFD PHVIE AP HP IEHV GDMF SVPKGDAIF+KWI HDW DEHC+K LKNCY+S+PEDG
Sbjct:  167 DPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDG 289          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 5.553e-46
Identity = 81/123 (65.85%), Postives = 95/123 (77.24%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M NH+++ M  ILE+Y GF  +K +VDVGG  G TL  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVPKGDAIF+KWI HDW DEHC+K LKNCY ++P++G
Sbjct:  167 DPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNG 289          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 7.252e-46
Identity = 81/123 (65.85%), Postives = 96/123 (78.05%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M NH+++IM  ILE Y+GF  +K +VDVGG  G TL  I SKYP IKGINFD PHVIE AP +P ++HV GDMF SVPKGDAIF+KWI HDW D HCLK LKNC++++PE+G
Sbjct:  169 DPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENG 291          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 2.110e-45
Identity = 80/123 (65.04%), Postives = 94/123 (76.42%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  ILE+YKGF  +  +VDVGG  G  L  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVPKGDAIF+KWI HDW DEHCLK LKNCY ++P++G
Sbjct:  169 DPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNG 291          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 3.599e-45
Identity = 79/123 (64.23%), Postives = 95/123 (77.24%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M NH+++ M  ILE Y+GF  +K +VDVGG  G TL  I SKYP IKGINF+ PHV+E AP H  +EHV GDMF SVPKGDAIF+KWI HDW D+HC KLLKNCY+++P++G
Sbjct:  156 DPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNG 278          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.140e-45
Identity = 79/123 (64.23%), Postives = 94/123 (76.42%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M NH+++ M  ILE+Y GF  +K +VDVGG  G TL  I SKYP IKGINFD PHV+E AP +P +EHV GDMF SVPKGDAIF+KWI HDW D HC+K LK CY+++PE+G
Sbjct:  167 DPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENG 289          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 6.140e-45
Identity = 77/123 (62.60%), Postives = 94/123 (76.42%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  ILE+Y GF  +K LVDVGG  G  +  I SKYP IKGINFD PHVIE AP +P +EHV GDMF S+PK DA+F+KWI HDW DEHCLK LKNCY+++P++G
Sbjct:  169 DPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNG 291          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 8.018e-45
Identity = 78/123 (63.41%), Postives = 94/123 (76.42%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  ILE+YKGF  +  +VDVGG  G  +  I SKYP IKGINFD PHVIE AP +P ++HV GDMF SVPKGDAIF+KWI HDW DEHCLK LKNCY ++P++G
Sbjct:  169 DPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNG 291          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.333e-44
Identity = 78/123 (63.41%), Postives = 92/123 (74.80%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  ILE+YKGF  +  LVDVGG  G  +  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVPK DA+F+KWI HDW D HCLK LKNCY ++PE+G
Sbjct:  169 DPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKADAVFMKWICHDWSDAHCLKFLKNCYDALPENG 291          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.980e-44
Identity = 78/123 (63.41%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  I E Y GF  +  +VDVGG  G  L  I +KYP IKGINFD PHVIE AP++P +EHV GDMF SVPKGDAIF+KWI HDW DEHCLK LKNCY ++PE G
Sbjct:  174 DPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHG 296          
The following BLAST results are available for this feature:
BLAST of CF504447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OMT1_ARATH3.146e-4969.92Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_OCIBA5.553e-4665.85Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CATRO7.252e-4665.85Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_PRUDU2.110e-4565.04Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_COFCA3.599e-4564.23Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_OCIBA6.140e-4564.23Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
COMT1_MEDSA6.140e-4562.60Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH8.018e-4563.41Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_POPTM2.333e-4463.41Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_CLABR3.980e-4463.41Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-936 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504447 ID=CF504447; Name=CF504447; organism=Citrus sinensis; type=EST; length=379bp
GGACGAGTGGACCCTAGGTTCAATAAACATTTTAACACAGCAATGTATAA
CCATACCTCTCTGATTATGAGCAACATTCTTGAATCTTACAAGGGCTTCG
CCAACATCAAGCAACTGGTCGATGTTGGTGGCAATCTCGGCGTTACTCTT
CAAGCCATCACTTCCAAGTACCCCTATATTAAGGGCATCAATTTCGACCA
GCCTCATGTTATTGAGCATGCCCCACTACATCCACATATTGAGCATGTAG
CGGGTGATATGTTTCAAAGTGTTCCAAAAGGCGACGCCATTTTTCTGAAG
TGGATACTGCACGATTGGGACGATGAACATTGCTTGAAGTTGTTGAAGAA
TTGCTACAAAAGCGTTCCAGAAGATGGAA
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