CF504484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504484 vs. ExPASy Swiss-Prot
Match: VATG_CITLI (V-type proton ATPase subunit G OS=Citrus limon GN=VATG PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.787e-30 Identity = 66/88 (75.00%), Postives = 68/88 (77.27%), Query Frame = 1 Query: 103 LLPRARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 366 ++ ARNAKMARL QVEREFQRKLAES GDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQM LKHVTTVKN Sbjct: 23 IVAAARNAKMARLKQAKEEAEREIAEYRAQVEREFQRKLAESVGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMFLKHVTTVKN 110 HSP 2 Score: 28.1054 bits (61), Expect = 1.787e-30 Identity = 14/31 (45.16%), Postives = 15/31 (48.39%), Query Frame = 3 Query: 36 MASNRGHGGIXXXXXXXXXXXHIVAACQKCK 128 M SNRG GGI HIVAA + K Sbjct: 1 MTSNRGQGGIQQLLAAEQEAQHIVAAARNAK 31
BLAST of CF504484 vs. ExPASy Swiss-Prot
Match: VAGT1_ARATH (V-type proton ATPase subunit G1 OS=Arabidopsis thaliana GN=VHA-G1 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.062e-20 Identity = 51/84 (60.71%), Postives = 57/84 (67.86%), Query Frame = 1 Query: 115 ARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 366 AR AKMARL Q E++FQRKL E+SGDSGANVKRLEQET+ KI LK A +I DVV+MLLKHVTTVKN Sbjct: 27 ARTAKMARLKQAKEEAEKEIAEYKAQTEQDFQRKLEETSGDSGANVKRLEQETDTKIEQLKNEASRISKDVVEMLLKHVTTVKN 110 HSP 2 Score: 22.7126 bits (47), Expect = 6.062e-20 Identity = 12/31 (38.71%), Postives = 13/31 (41.94%), Query Frame = 3 Query: 36 MASNRGHGGIXXXXXXXXXXXHIVAACQKCK 128 M SNRG G I HIV A + K Sbjct: 1 MESNRGQGSIQQLLAAEVEAQHIVNAARTAK 31
BLAST of CF504484 vs. ExPASy Swiss-Prot
Match: VATG1_TOBAC (V-type proton ATPase subunit G 1 OS=Nicotiana tabacum GN=VATG1 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.511e-19 Identity = 50/88 (56.82%), Postives = 59/88 (67.05%), Query Frame = 1 Query: 103 LLPRARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 366 ++ AR AK ARL +E EFQRKL ++SGDSGANVKRLEQET+ KI HLK AE++ DVVQMLL+HVTTVKN Sbjct: 23 IVNNARTAKQARLKQAKEEAEKEIAEFRAYMEAEFQRKLEQTSGDSGANVKRLEQETDAKIEHLKTEAERVSPDVVQMLLRHVTTVKN 110
BLAST of CF504484 vs. ExPASy Swiss-Prot
Match: VATG2_TOBAC (V-type proton ATPase subunit G 2 OS=Nicotiana tabacum GN=VATG2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.167e-17 Identity = 46/84 (54.76%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 115 ARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 366 AR K AR+ +E EFQR + ++SGDSGANVKRLEQET KI HLK AE I +DVVQMLL+ VTTVKN Sbjct: 28 ARTGKQARMKQAKEEAEKEIAEFRAYMEAEFQRNVEQTSGDSGANVKRLEQETFAKIQHLKTEAESISHDVVQMLLRQVTTVKN 111
BLAST of CF504484 vs. ExPASy Swiss-Prot
Match: VATG2_ARATH (V-type proton ATPase subunit G2 OS=Arabidopsis thaliana GN=VHA-G2 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 1.729e-15 Identity = 46/93 (49.46%), Postives = 55/93 (59.14%), Query Frame = 1 Query: 88 KKLNTLLPRARNAKMARLXXXXXXXXXXXXXXXXQVEREFQRKLAESSGDSGANVKRLEQETEVKIHHLKAGAEKIQYDVVQMLLKHVTTVKN 366 ++ ++ AR AKM RL E+ FQRKL +SGDSGANVKRLEQET+ KI LK A +I DVV MLLK+VTTV N Sbjct: 14 REAQQIVNAARTAKMTRLKQAKEEAETEVAEHKTSTEQGFQRKLEATSGDSGANVKRLEQETDAKIEQLKNEATRISKDVVDMLLKNVTTVNN 106 The following BLAST results are available for this feature:
BLAST of CF504484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504484 ID=CF504484; Name=CF504484; organism=Citrus sinensis; type=EST; length=386bpback to top |