CF504485

Overview
NameCF504485
Unique NameCF504485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length351
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11180 contig Csv1_Contig11180:203..550. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 9.490e-54
Identity = 105/120 (87.50%), Postives = 108/120 (90.00%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIWMRKPEEITKEEYAAFYKSLTND     W     VKHFSVEGQLEFKA+LFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNC+ELIPEYL FVKGI DSEDLPLNISRETLQQ
Sbjct:  262 NKQKPIWMRKPEEITKEEYAAFYKSLTND-----WEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCDELIPEYLSFVKGIVDSEDLPLNISRETLQQ 376
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 206.838 bits (525), Expect = 2.761e-53
Identity = 104/120 (86.67%), Postives = 108/120 (90.00%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIWMRKPEEI KEEYAAFYKSL+ND     W     VKHFSVEGQLEFKAILFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNCE++IPEYLGFVKGI DSEDLPLNISRETLQQ
Sbjct:  262 NKQKPIWMRKPEEINKEEYAAFYKSLSND-----WEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRETLQQ 376
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 2.761e-53
Identity = 104/120 (86.67%), Postives = 108/120 (90.00%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIWMRKPEEI KEEYAAFYKSL+ND     W     VKHFSVEGQLEFKAILFVPKRAPFDLFDT+KKPNNIKLYVRRVFIMDNCE++IPEYLGFVKGI DSEDLPLNISRETLQQ
Sbjct:  262 NKQKPIWMRKPEEINKEEYAAFYKSLSND-----WEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEDIIPEYLGFVKGIVDSEDLPLNISRETLQQ 376
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 1.370e-52
Identity = 104/120 (86.67%), Postives = 107/120 (89.17%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIW+RKPEEITKEEYAAFYKSLTND     W     VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYL FVKG+ DS+DLPLNISRETLQQ
Sbjct:  263 NKQKPIWLRKPEEITKEEYAAFYKSLTND-----WEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLSFVKGVVDSDDLPLNISRETLQQ 377
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.337e-52
Identity = 103/120 (85.83%), Postives = 107/120 (89.17%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIW+RKPEEITKEEYA+FYKSLTND     W     VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+ DS+DLPLNISRE LQQ
Sbjct:  267 NKQKPIWLRKPEEITKEEYASFYKSLTND-----WEDHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQ 381
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 5.207e-52
Identity = 104/120 (86.67%), Postives = 106/120 (88.33%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIW+RKPEEITKEEYAAFYKSLTND     W     VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGI DSEDLPLNISRE LQQ
Sbjct:  264 NKQKPIWLRKPEEITKEEYAAFYKSLTND-----WEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQ 378
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP82_TOBAC (Heat shock protein 82 (Fragment) OS=Nicotiana tabacum GN=HSP82 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 5.207e-52
Identity = 102/120 (85.00%), Postives = 107/120 (89.17%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIW+RKPEEITK+EYA+FYKSLTND     W     VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPEYLGFVKG+ DS+DLPLNISRE LQQ
Sbjct:   63 NKQKPIWLRKPEEITKDEYASFYKSLTND-----WEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKMNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISREMLQQ 177
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 5.207e-52
Identity = 104/120 (86.67%), Postives = 106/120 (88.33%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIW+RKPEEITKEEYAAFYKSLTND     W     VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGI DSEDLPLNISRE LQQ
Sbjct:  264 NKQKPIWLRKPEEITKEEYAAFYKSLTND-----WEEHLAVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKQNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQ 378
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 5.207e-52
Identity = 104/120 (86.67%), Postives = 106/120 (88.33%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIWMRKPEEITKEEYAAFYKSLTND     W     VKHFSVEGQLEFKA+LFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGI DSEDLPLNISRE LQQ
Sbjct:  264 NKQKPIWMRKPEEITKEEYAAFYKSLTND-----WEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQ 378
[Close]
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 5.207e-52
Identity = 104/120 (86.67%), Postives = 106/120 (88.33%), Query Frame = 3 
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            NKQKPIWMRKPEEITKEEYAAFYKSLTND     W     VKHFSVEGQLEFKA+LFVPKRAPFDLFDTRKK NNIKLYVRRVFIMDNCEELIPE+L FVKGI DSEDLPLNISRE LQQ
Sbjct:  264 NKQKPIWMRKPEEITKEEYAAFYKSLTND-----WEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQ 378
The following BLAST results are available for this feature:
BLAST of CF504485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HSP80_SOLLC9.490e-5487.50Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP83_ARATH2.761e-5386.67Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP82_ARATH2.761e-5386.67Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP81_ARATH1.370e-5286.67Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI2.337e-5285.83Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP83_ORYSJ5.207e-5286.67Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_TOBAC5.207e-5285.00Heat shock protein 82 (Fragment) OS=Nicotiana taba... [more]
HSP82_ORYSJ5.207e-5286.67Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSJ5.207e-5286.67Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI5.207e-5286.67Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-974 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504485 ID=CF504485; Name=CF504485; organism=Citrus sinensis; type=EST; length=351bp
TGAACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAA
GAAGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACCTGGGAGGAGC
ACCTTGGCCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGG
CTATCCTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGG
AAGAAGCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGA
CAACTGTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTG
GTGATTCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAG
A
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