CF504543

Overview
NameCF504543
Unique NameCF504543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length245
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504543 vs. ExPASy Swiss-Prot
Match: ADK2_ARATH (Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.679e-24
Identity = 53/63 (84.13%), Postives = 58/63 (92.06%), Query Frame = 2
Query:   56 ASMAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKETVEYIAG 244
            +S  Y+GILLGMGNPLLDISAVVD+EFL KYDIKLNNAILAEDKHLPMYDE++SK  VEYIAG
Sbjct:    3 SSSNYDGILLGMGNPLLDISAVVDDEFLTKYDIKLNNAILAEDKHLPMYDEMSSKFNVEYIAG 65          
BLAST of CF504543 vs. ExPASy Swiss-Prot
Match: ADK1_ARATH (Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23
Identity = 50/63 (79.37%), Postives = 57/63 (90.48%), Query Frame = 2
Query:   56 ASMAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKETVEYIAG 244
            AS  ++GILLGMGNPLLD+SAVVD++FL KYDIKLNNAILAEDKHLPMYDE++ K  VEYIAG
Sbjct:    2 ASSDFDGILLGMGNPLLDVSAVVDQQFLDKYDIKLNNAILAEDKHLPMYDEMSQKFNVEYIAG 64          
BLAST of CF504543 vs. ExPASy Swiss-Prot
Match: ADK_PHYPA (Adenosine kinase OS=Physcomitrella patens GN=ADK PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.944e-20
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 2
Query:   62 MAYEGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKETVEYIAG 244
            MA EG+LLGMGNPLLDIS VVD+ FL+KY + LNNAILAEDKHLPMY ELA+   VEYIAG
Sbjct:    1 MASEGVLLGMGNPLLDISCVVDDAFLEKYGLTLNNAILAEDKHLPMYKELAANPDVEYIAG 61          
BLAST of CF504543 vs. ExPASy Swiss-Prot
Match: ADK_HUMAN (Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.516e-15
Identity = 39/58 (67.24%), Postives = 45/58 (77.59%), Query Frame = 2
Query:   71 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKETVEYIAG 244
            E IL GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH  ++DEL  K  VEY AG
Sbjct:   23 ENILFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG 80          
BLAST of CF504543 vs. ExPASy Swiss-Prot
Match: ADK_RAT (Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 2
Query:   71 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKETVEYIAG 244
            E +L GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH  ++DEL  K  VEY AG
Sbjct:   22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG 79          
BLAST of CF504543 vs. ExPASy Swiss-Prot
Match: ADK_MOUSE (Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.510e-15
Identity = 38/58 (65.52%), Postives = 45/58 (77.59%), Query Frame = 2
Query:   71 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKETVEYIAG 244
            E +L GMGNPLLDISAVVD++FL KY +K N+ ILAEDKH  ++DEL  K  VEY AG
Sbjct:   22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAG 79          
BLAST of CF504543 vs. ExPASy Swiss-Prot
Match: ADK_CRIGR (Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.234e-14
Identity = 37/58 (63.79%), Postives = 45/58 (77.59%), Query Frame = 2
Query:   71 EGILLGMGNPLLDISAVVDEEFLKKYDIKLNNAILAEDKHLPMYDELASKETVEYIAG 244
            E +L GMGNPLLDISAVVD++FL KY +K N+ ILAE+KH  ++DEL  K  VEY AG
Sbjct:   22 ENVLFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEEKHKELFDELVRKFKVEYHAG 79          
The following BLAST results are available for this feature:
BLAST of CF504543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ADK2_ARATH7.679e-2484.13Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2... [more]
ADK1_ARATH8.491e-2379.37Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1... [more]
ADK_PHYPA3.944e-2077.05Adenosine kinase OS=Physcomitrella patens GN=ADK P... [more]
ADK_HUMAN6.516e-1567.24Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2[more]
ADK_RAT8.510e-1565.52Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 ... [more]
ADK_MOUSE8.510e-1565.52Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2[more]
ADK_CRIGR3.234e-1463.79Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-032 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504543 ID=CF504543; Name=CF504543; organism=Citrus sinensis; type=EST; length=245bp
GTGAGATCTAGCCATTGAACTGAGCTTGTTAGTTGATCTCTTTGTAAAAT
CTTTTGCATCAATGGCGTACGAAGGGATCCTGTTGGGCATGGGAAACCCA
CTTCTTGACATTTCAGCGGTTGTTGACGAAGAGTTCTTGAAAAAATATGA
CATCAAGTTGAACAATGCTATTCTTGCTGAAGACAAGCACTTGCCCATGT
ATGATGAATTAGCTTCCAAAGAAACTGTGGAGTATATTGCTGGGG
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