CF504636

Overview
NameCF504636
Unique NameCF504636
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2838 contig Csv1_Contig2838:5..684. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_MOUSE (Phosphate carrier protein, mitochondrial OS=Mus musculus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.001e-27
Identity = 58/113 (51.33%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  287 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPE 625
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G++G  +GW PTL+GYS QG C            S+I G E
Sbjct:   38 RSRHLAAAAVEEYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEE 150          

HSP 2 Score: 21.9422 bits (45), Expect = 1.001e-27
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            ++T +YLA SASAE
Sbjct:  155 WRTSLYLASSASAE 168          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_RAT (Phosphate carrier protein, mitochondrial OS=Rattus norvegicus GN=Slc25a3 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.304e-27
Identity = 58/113 (51.33%), Postives = 69/113 (61.06%), Query Frame = 2
Query:  287 RRSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPE 625
            R   + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF + LKE G++G  +GW PTL+GYS QG C            S+I G E
Sbjct:   37 RSRHLAAAAVEGYSCEFGSMKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSITLKEDGVRGLAKGWAPTLIGYSMQGLCKFGFYEVFKALYSNILGEE 149          

HSP 2 Score: 21.9422 bits (45), Expect = 1.304e-27
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            ++T +YLA SASAE
Sbjct:  154 WRTSLYLAASASAE 167          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_PONAB (Phosphate carrier protein, mitochondrial OS=Pongo abelii GN=SLC25A3 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.742e-27
Identity = 57/109 (52.29%), Postives = 67/109 (61.47%), Query Frame = 2
Query:  299 VVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPE 625
            + AA  E    E  S  +YA C  GG+LSCGLTHTAV PLDLVKC MQ+DP KYK I +GF V LKE G++G  +GW PT LGYS QG C            S++ G E
Sbjct:   46 LAAAAVEEYSCEFGSAKYYALCGFGGVLSCGLTHTAVVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEE 154          

HSP 2 Score: 21.9422 bits (45), Expect = 3.742e-27
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            ++T +YLA SASAE
Sbjct:  159 WRTSLYLAASASAE 172          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_BOVIN (Phosphate carrier protein, mitochondrial OS=Bos taurus GN=SLC25A3 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.802e-26
Identity = 55/114 (48.25%), Postives = 68/114 (59.65%), Query Frame = 2
Query:  290 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYA 631
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYKSI +GF V LKE G +G  +GW PT +GYS QG C            S++ G E A
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKSIFNGFSVTLKEDGFRGLAKGWAPTFIGYSLQGLCKFGFYEVFKVLYSNMLGEENA 157          

HSP 2 Score: 21.9422 bits (45), Expect = 6.802e-26
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            ++T +YLA SASAE
Sbjct:  160 WRTSLYLAASASAE 173          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_CAEEL (Phosphate carrier protein, mitochondrial OS=Caenorhabditis elegans GN=F01G4.6 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 6.809e-26
Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 2
Query:  305 AAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPEYA 631
            +A S PG++E  S  +YA C +GG+LSCG+THTA+ PLDLVKC +Q++P KY  I++GF   + E+G +   +GW PTLLGYSAQG              +D+ G E A
Sbjct:   27 SAVSAPGQVEFGSGKYYAYCALGGVLSCGITHTAIVPLDLVKCRIQVNPEKYTGIATGFRTTIAEEGARALVKGWAPTLLGYSAQGLGKFGFYEIFKNVYADMLGEENA 135          

HSP 2 Score: 23.8682 bits (50), Expect = 6.809e-26
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            Y+T +YLA SASAE
Sbjct:  138 YRTSLYLAASASAE 151          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_HUMAN (Phosphate carrier protein, mitochondrial OS=Homo sapiens GN=SLC25A3 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 8.854e-26
Identity = 54/112 (48.21%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  290 RSFVVAAPSEPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGACXXXXXXXXXXXXSDIAGPE 625
            R+   AA  E    +  S  F+  C +GGI+SCG THTA+ PLDLVKC MQ+DP KYK I +GF V LKE G++G  +GW PT LGYS QG C            S++ G E
Sbjct:   44 RNLAAAAVEEQYSCDYGSGRFFILCGLGGIISCGTTHTALVPLDLVKCRMQVDPQKYKGIFNGFSVTLKEDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEE 155          

HSP 2 Score: 21.9422 bits (45), Expect = 8.854e-26
Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            ++T +YLA SASAE
Sbjct:  160 WRTSLYLAASASAE 173          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_CHOFU (Phosphate carrier protein, mitochondrial OS=Choristoneura fumiferana PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 3.544e-24
Identity = 44/79 (55.70%), Postives = 60/79 (75.95%), Query Frame = 2
Query:  332 EMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGAC 568
            E  S  ++A C +GGILSCG+THTAV PLDLVKC +Q+D  KYK++ +GF V ++E+G++G  +GW PT +GYS QG C
Sbjct:   42 EFGSTKYFALCGLGGILSCGITHTAVVPLDLVKCRLQVDADKYKNVVNGFRVSVREEGLRGLAKGWAPTFIGYSLQGLC 120          

HSP 2 Score: 25.0238 bits (53), Expect = 3.544e-24
Identity = 10/14 (71.43%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            Y+T +YLA SASAE
Sbjct:  144 YRTFVYLAASASAE 157          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MPCP_SCHPO (Probable mitochondrial phosphate carrier protein OS=Schizosaccharomyces pombe GN=SPBC1703.13c PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.874e-22
Identity = 40/85 (47.06%), Postives = 63/85 (74.12%), Query Frame = 2
Query:  311 PSEPGK-IEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQG 562
            P+ P K +++Y+P +Y  CT+GG+L+CG TH+A+TPLDL+KC  Q++P  Y    +GF  +L ++G++G + G +PTL+GYS QG
Sbjct:    8 PAPPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSLQG 92          

HSP 2 Score: 24.6386 bits (52), Expect = 6.874e-22
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 1
Query:  637 YKTLIYLAGSASAE 678
            Y+T IYLA SASAE
Sbjct:  118 YRTSIYLAASASAE 131          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: PIC2_YEAST (Mitochondrial phosphate carrier protein 2 OS=Saccharomyces cerevisiae GN=PIC2 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18
Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 2
Query:  317 EPGKIEMYSPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQGA 565
            +P KI++Y+  FYA CT+GGI++CG TH+++TPLDLVKC +Q++P  Y S   GF  ++  +G K  + G+  T +GYS QGA
Sbjct:    6 QPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQGA 88          
BLAST of CF504636 vs. ExPASy Swiss-Prot
Match: MCFN_DICDI (Mitochondrial substrate carrier family protein N OS=Dictyostelium discoideum GN=mcfN PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.229e-12
Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 2
Query:  341 SPAFYAACTVGGILSCGLTHTAVTPLDLVKCNMQIDPVKYKSISSGFGVLLKEQGIKGFFRGWVPTLLGYSAQG 562
            +P+ +     GG LSC +TH+ V PLD+VK  +Q +P KY  + +GF  ++KEQG  G  +G  PT +GY+ QG
Sbjct:    6 TPSLFLKYGFGGALSCSITHSLVVPLDVVKTLLQTNPGKYTGMMNGFSTVIKEQGPSGLLQGLGPTAVGYALQG 79          
The following BLAST results are available for this feature:
BLAST of CF504636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
MPCP_MOUSE1.001e-2751.33Phosphate carrier protein, mitochondrial OS=Mus mu... [more]
MPCP_RAT1.304e-2751.33Phosphate carrier protein, mitochondrial OS=Rattus... [more]
MPCP_PONAB3.742e-2752.29Phosphate carrier protein, mitochondrial OS=Pongo ... [more]
MPCP_BOVIN6.802e-2648.25Phosphate carrier protein, mitochondrial OS=Bos ta... [more]
MPCP_CAEEL6.809e-2646.79Phosphate carrier protein, mitochondrial OS=Caenor... [more]
MPCP_HUMAN8.854e-2648.21Phosphate carrier protein, mitochondrial OS=Homo s... [more]
MPCP_CHOFU3.544e-2455.70Phosphate carrier protein, mitochondrial OS=Choris... [more]
MPCP_SCHPO6.874e-2247.06Probable mitochondrial phosphate carrier protein O... [more]
PIC2_YEAST1.354e-1848.19Mitochondrial phosphate carrier protein 2 OS=Sacch... [more]
MCFN_DICDI3.229e-1243.24Mitochondrial substrate carrier family protein N O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-125 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-1_E12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504636 ID=CF504636; Name=CF504636; organism=Citrus sinensis; type=EST; length=679bp
CTTTGCCCGGGTTCTAACAAATTGGAAGCGAGAGACAGGAGGAGGAGAAG
AGAAAGAGAAAATTAGAAGAATTCTCTCTGTCTCGCTCTTTTTCTCTATA
ATTCAATCAAGCTTTTTACTCTCAAAATCAAATTTCAAAAATTCCGAAAT
GGCCCTCACAGAATCTTATAGGAAAAACTCTCTGATACCAAGCTACCTCT
ACTCCTCCCAAACATCCTTCCCGTCCACGGCGGCTTTCAATGGAGCGGCA
ACAGCCGCCACGTCGCCGGCTACTCCATCCACGGCGAGGAGGAGCTTCGT
TGTTGCGGCACCGAGCGAGCCAGGGAAGATAGAGATGTACTCCCCTGCAT
TCTACGCCGCTTGTACCGTCGGCGGGATCCTCAGCTGCGGTCTCACTCAC
ACGGCCGTCACTCCTCTTGACCTCGTCAAGTGCAATATGCAGATTGATCC
TGTTAAGTATAAAAGCATATCATCTGGTTTTGGAGTTTTGCTCAAGGAAC
AGGGAATCAAGGGCTTCTTCAGGGGATGGGTACCTACCTTGCTTGGTTAC
AGCGCCCAAGGTGCTTGCAAGTTTGGATTCTACGAGTTCTTCAAGAAGTA
CTACTCTGACATTGCTGGTCCAGAGTATGCTGCTAATACAAGACTTTAAT
CTACCTTGCTGGCTCTGCTTCTGCTGAGT
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