CF504716

Overview
NameCF504716
Unique NameCF504716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length247
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2456 contig Csv1_Contig2456:54..300. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.001e-34
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRK+KKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEI
Sbjct:  247 FVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 290

HSP 2 Score: 80.8777 bits (198), Expect = 1.001e-34
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH     ++K
Sbjct:  210 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRK 254
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.001e-34
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRK+KKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEI
Sbjct:  247 FVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 290

HSP 2 Score: 80.8777 bits (198), Expect = 1.001e-34
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH     ++K
Sbjct:  210 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRK 254
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.001e-34
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRK+KKDISGNPRALRRLRT+CERAKRTLSSTAQTTIEI
Sbjct:  245 FVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEI 288

HSP 2 Score: 80.8777 bits (198), Expect = 1.001e-34
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH     ++K
Sbjct:  208 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRK 252
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.698e-34
Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRKHKKDI+GNPRALRRLRT+CERAKRTLSSTAQTTIEI
Sbjct:  247 FVHEFKRKHKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEI 290

HSP 2 Score: 80.4925 bits (197), Expect = 1.698e-34
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH     ++K
Sbjct:  210 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVHEFKRK 254
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.212e-34
Identity = 41/44 (93.18%), Postives = 44/44 (100.00%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRK+KKDI+GNPRALRRLRT+CERAKRTLSSTAQTTIEI
Sbjct:  247 FVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEI 290

HSP 2 Score: 80.8777 bits (198), Expect = 2.212e-34
Identity = 38/45 (84.44%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNH     ++K
Sbjct:  210 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRK 254
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP71_PUCGR (Heat shock protein HSS1 OS=Puccinia graminis GN=HSS1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.080e-33
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRKHKKD+S NPRALRRLRT+CERAKRTLSS AQTTIEI
Sbjct:  239 FVQEFKRKHKKDLSSNPRALRRLRTACERAKRTLSSAAQTTIEI 282

HSP 2 Score: 79.7221 bits (195), Expect = 1.080e-33
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRK 246
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.106e-33
Identity = 37/45 (82.22%), Postives = 41/45 (91.11%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIEEGIFEVKATAGDTHLGGEDFDNRMVNH  +  ++K
Sbjct:  209 TFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVSEFKRK 253

HSP 2 Score: 80.4925 bits (197), Expect = 3.106e-33
Identity = 40/44 (90.91%), Postives = 42/44 (95.45%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRK+KKDISGN RALRRLRT+CERAKRTLSSTAQTTIEI
Sbjct:  246 FVSEFKRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEI 289
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 5.677e-32
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVS+LTIE+GIFEVK+TAGDTHLGGEDFDNRMVNH CA  ++K
Sbjct:  205 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRK 249

HSP 2 Score: 73.559 bits (179), Expect = 5.677e-32
Identity = 34/44 (77.27%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            F  EFKRKHKKD++ NPRALRRLRT+CERAKRTLSS++Q +IEI
Sbjct:  242 FCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEI 285
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 7.392e-32
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVK+TAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVQEFKRK 246

HSP 2 Score: 78.1814 bits (191), Expect = 7.392e-32
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FVQEFKRKHKKD+S N RALRRLRT+CERAKRTLSS+AQT+IEI
Sbjct:  239 FVQEFKRKHKKDLSTNARALRRLRTACERAKRTLSSSAQTSIEI 282
[Close]
BLAST of CF504716 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.632e-31
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 3 
Query:    3 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHLCARVQKK 137
            TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNR+VNH     ++K
Sbjct:  202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFKRK 246

HSP 2 Score: 75.485 bits (184), Expect = 1.632e-31
Identity = 37/44 (84.09%), Postives = 40/44 (90.91%), Query Frame = 1 
Query:  115 FVQEFKRKHKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEI 246
            FV EFKRKHKKD+S N RALRRLRT+CERAKRTLSS AQT+IEI
Sbjct:  239 FVTEFKRKHKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEI 282
The following BLAST results are available for this feature:
BLAST of CF504716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7C_PETHY1.001e-3495.45Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH1.001e-3495.45Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_MAIZE1.001e-3495.45Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP71_SOLLC1.698e-3493.18Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP72_SOLLC2.212e-3493.18Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP71_PUCGR1.080e-3390.91Heat shock protein HSS1 OS=Puccinia graminis GN=HS... [more]
HSP70_SOYBN3.106e-3382.22Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP7A_CAEEL5.677e-3282.22Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP70_NEUCR7.392e-3280.00Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_EMENI1.632e-3182.22Heat shock 70 kDa protein OS=Emericella nidulans G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-206 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-20_H02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504716 ID=CF504716; Name=CF504716; organism=Citrus sinensis; type=EST; length=247bp
GTACTTTTGATGTGTCTCTTCTTACCATTGAAGAGGGTATCTTTGAAGTT
AAAGCCACAGCTGGTGATACCCATCTTGGTGGTGAGGATTTTGATAACAG
AATGGTTAACCACCTTTGTGCAAGAGTTCAAAAGAAAGCACAAGAAGGAC
ATTAGTGGTAACCCCAGAGCTCTAAGGAGGTTGAGAACTTCCTGTGAAAG
AGCTAAGAGGACTCTCTCATCAACCGCCCAGACCACCATTGAGATTG
back to top