CF504793

Overview
NameCF504793
Unique NameCF504793
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length296
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: TRC_DROPS (Serine/threonine-protein kinase tricorner OS=Drosophila pseudoobscura pseudoobscura GN=trc PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.683e-18
Identity = 52/99 (52.53%), Postives = 60/99 (60.61%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDG-CFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L  S     H      D + A+P D  G C    D+K        + + W+ NRR LA+STVGTPDYIAPE
Sbjct:  212 IHRDIKPDNLLLDARGHLKLSDFGLCTGLKKS-----HRTDFYRDLSQAKPSDFIGTCASPMDSK-------RRAESWKRNRRALAYSTVGTPDYIAPE 298          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: STK38_PONAB (Serine/threonine-protein kinase 38 OS=Pongo abelii GN=STK38 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.394e-18
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L          H+T    N+   +  D  F + ++K        + + W+ NRR+LAFSTVGTPDYIAPE
Sbjct:  209 IHRDIKPDNLLLDSKGHVKLSDFGLCTGLK-------KAHRTEFYRNLNHSLPSDFTFQNMNSK-------RKAETWKRNRRQLAFSTVGTPDYIAPE 292          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: STK38_MOUSE (Serine/threonine-protein kinase 38 OS=Mus musculus GN=Stk38 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.394e-18
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L          H+T    N+   +  D  F + ++K        + + W+ NRR+LAFSTVGTPDYIAPE
Sbjct:  209 IHRDIKPDNLLLDSKGHVKLSDFGLCTGLK-------KAHRTEFYRNLNHSLPSDFTFQNMNSK-------RKAETWKRNRRQLAFSTVGTPDYIAPE 292          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: STK38_HUMAN (Serine/threonine-protein kinase 38 OS=Homo sapiens GN=STK38 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.394e-18
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L          H+T    N+   +  D  F + ++K        + + W+ NRR+LAFSTVGTPDYIAPE
Sbjct:  209 IHRDIKPDNLLLDSKGHVKLSDFGLCTGLK-------KAHRTEFYRNLNHSLPSDFTFQNMNSK-------RKAETWKRNRRQLAFSTVGTPDYIAPE 292          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: STK38_BOVIN (Serine/threonine-protein kinase 38 OS=Bos taurus GN=STK38 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.394e-18
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L          H+T    N+   +  D  F + ++K        + + W+ NRR+LAFSTVGTPDYIAPE
Sbjct:  209 IHRDIKPDNLLLDSKGHVKLSDFGLCTGLK-------KAHRTEFYRNLNHSLPSDFTFQNMNSK-------RKAETWKRNRRQLAFSTVGTPDYIAPE 292          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: TRC_DROME (Serine/threonine-protein kinase tricorner OS=Drosophila melanogaster GN=trc PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.425e-17
Identity = 50/98 (51.02%), Postives = 57/98 (58.16%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L  S     H      D + A+P D  G         S      + + W+ NRR LA+STVGTPDYIAPE
Sbjct:  213 IHRDIKPDNLLLDARGHLKLSDFGLCTGLKKS-----HRTDFYRDLSQAKPSDFIGTCASL--SCSPMDSKRRAESWKRNRRALAYSTVGTPDYIAPE 303          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: CBK1_YARLI (Serine/threonine-protein kinase CBK1 OS=Yarrowia lipolytica GN=CBK1 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.173e-17
Identity = 47/102 (46.08%), Postives = 64/102 (62.75%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPH----EQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDN+L+DK GH+KLSDFGL         ++    K + D   + P    G   +T+ +S++ S H    +Q+  W+ NRR +A+STVGTPDYIAPE
Sbjct:  327 IHRDIKPDNILIDKTGHIKLSDFGLSTGF--HKTHSSAYWKKLKDGTSSNPATQMGPPQNTNRQSTYDSIHLTMRQQISTWRKNRRLMAYSTVGTPDYIAPE 426          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: ST38L_HUMAN (Serine/threonine-protein kinase 38-like OS=Homo sapiens GN=STK38L PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 4.145e-17
Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L          H+T    N+      D  F + ++K        + + W+ NRR+LA+STVGTPDYIAPE
Sbjct:  210 IHRDIKPDNLLLDAKGHVKLSDFGLCTGLK-------KAHRTEFYRNLTHNPPSDFSFQNMNSK-------RKAETWKKNRRQLAYSTVGTPDYIAPE 293          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: ST38L_MOUSE (Serine/threonine-protein kinase 38-like OS=Mus musculus GN=Stk38l PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.413e-17
Identity = 47/98 (47.96%), Postives = 59/98 (60.20%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRD+KPDNLLLD  GH+KLSDFGLC  L          H+T    N+      D  F + ++K        + + W+ NRR+LA+STVGTPDYIAPE
Sbjct:  210 IHRDVKPDNLLLDAKGHVKLSDFGLCTGLK-------KAHRTEFYRNLTHNPPSDFSFQNMNSK-------RKAETWKKNRRQLAYSTVGTPDYIAPE 293          
BLAST of CF504793 vs. ExPASy Swiss-Prot
Match: SAX1_CAEEL (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.879e-15
Identity = 46/98 (46.94%), Postives = 55/98 (56.12%), Query Frame = 1
Query:    1 IHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSTLYAIHEHKTIDDENMAEPMDIDGCFPDTDNKSSWKSPHEQLQHWQMNRRKLAFSTVGTPDYIAPE 294
            IHRDIKPDNLLLD  GH+KLSDFGLC  L          H+T    N    +  D      ++K        + + W+ NRR  A+STVGTPDYIAPE
Sbjct:  207 IHRDIKPDNLLLDARGHVKLSDFGLCTGLK-------KFHRTDHYRNWPSTLPPDFISKPFESK-------RKAETWKRNRRAYAYSTVGTPDYIAPE 290          
The following BLAST results are available for this feature:
BLAST of CF504793 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
TRC_DROPS1.683e-1852.53Serine/threonine-protein kinase tricorner OS=Droso... [more]
STK38_PONAB6.394e-1850.00Serine/threonine-protein kinase 38 OS=Pongo abelii... [more]
STK38_MOUSE6.394e-1850.00Serine/threonine-protein kinase 38 OS=Mus musculus... [more]
STK38_HUMAN6.394e-1850.00Serine/threonine-protein kinase 38 OS=Homo sapiens... [more]
STK38_BOVIN6.394e-1850.00Serine/threonine-protein kinase 38 OS=Bos taurus G... [more]
TRC_DROME1.425e-1751.02Serine/threonine-protein kinase tricorner OS=Droso... [more]
CBK1_YARLI3.173e-1746.08Serine/threonine-protein kinase CBK1 OS=Yarrowia l... [more]
ST38L_HUMAN4.145e-1748.98Serine/threonine-protein kinase 38-like OS=Homo sa... [more]
ST38L_MOUSE5.413e-1747.96Serine/threonine-protein kinase 38-like OS=Mus mus... [more]
SAX1_CAEEL3.879e-1546.94Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-283 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-21_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504793 ID=CF504793; Name=CF504793; organism=Citrus sinensis; type=EST; length=296bp
ATTCACAGAGATATTAAACCTGACAACCTTCTTCTGGACAAAAATGGTCA
TATGAAGTTATCAGATTTTGGCCTTTGCAAGCCTCTTGACTGTTCAACCT
TATATGCAATTCATGAACATAAAACCATTGATGATGAAAATATGGCGGAA
CCAATGGATATTGATGGATGCTTTCCTGACACGGATAATAAGAGTAGTTG
GAAAAGCCCCCATGAACAGCTTCAGCATTGGCAGATGAACAGGAGGAAAC
TGGCATTTTCGACCGTGGGAACACCTGACTACATTGCTCCTGAGGT
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