CF504795

Overview
NameCF504795
Unique NameCF504795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length383
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5224 contig Csv1_Contig5224:87..469. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_BETVU (Elongation factor 2 OS=Beta vulgaris PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.958e-59
Identity = 115/124 (92.74%), Postives = 120/124 (96.77%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MVKFTA+ LR IMD KHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYY+MTD+AL+SYKGER GN+YLINLIDSPGHVDFSSEVTAALRITDG
Sbjct:    1 MVKFTADELRAIMDCKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYQMTDEALQSYKGERKGNDYLINLIDSPGHVDFSSEVTAALRITDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_CHLKE (Elongation factor 2 OS=Chlorella kessleri PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.151e-51
Identity = 100/124 (80.65%), Postives = 113/124 (91.13%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MVKFT + +R +M++++NIRNMSVIAHVDHGKSTLTDSLVAAAGIIA E AGD R+TDTRADE ERGITIKSTGISLYY+MTD+ LK + GER GN++LINLIDSPGHVDFSSEVTAALRITDG
Sbjct:    1 MVKFTIDQIRGLMEYQNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAFEQAGDQRLTDTRADEQERGITIKSTGISLYYQMTDEQLKGFTGERQGNDFLINLIDSPGHVDFSSEVTAALRITDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 7.476e-43
Identity = 88/124 (70.97%), Postives = 98/124 (79.03%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT + +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISLY EM DD +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVNFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMGDDDVKEIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_YEAST (Elongation factor 2 OS=Saccharomyces cerevisiae GN=EFT1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 9.764e-43
Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT + +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISLY EM+D+ +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVAFTVDQMRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMSDEDVKEIKQKTDGNSFLINLIDSPGHVDFSSEVTAALRVTDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_SACKL (Elongation factor 2 OS=Saccharomyces kluyveri GN=EFT2 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 9.764e-43
Identity = 88/124 (70.97%), Postives = 99/124 (79.84%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT + +R +MD   NIRNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISL+ EM+DD +K  K +  GN +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVAFTVDQIRSLMDKVTNIRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSDDDVKDIKQKTEGNSFLINLIDSPGHVDFSSEVTAALRVTDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.275e-42
Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT + +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISL+ EM+DD +K  K + +GN +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVAFTVDQIRSLMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLFSEMSDDDVKDIKQKTDGNAFLINLIDSPGHVDFSSEVTAALRVTDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 2.175e-42
Identity = 86/124 (69.35%), Postives = 98/124 (79.03%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT E +R +M    N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AGD R  DTRADE ERG+TIKST ISL+ EMTDD +K  K   +G ++L+NLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAISLFAEMTDDDMKDMKEPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.841e-42
Identity = 88/124 (70.97%), Postives = 97/124 (78.23%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT E +R +MD   N+RNMSVIAHVDHGKSTLTDSLV  AGII+   AG+ R TDTR DE ERGITIKST ISLY  MTDD  K  + +  GN +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVAFTIEQIRELMDKVTNVRNMSVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYASMTDDDCKEIQQKTVGNSFLINLIDSPGHVDFSSEVTAALRVTDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_RAT (Elongation factor 2 OS=Rattus norvegicus GN=Eef2 PE=1 SV=4)

HSP 1 Score: 169.474 bits (428), Expect = 4.846e-42
Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT + +R IMD K NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR DE ER ITIKST ISL+YE++++ L   K  ++G+ +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDG 124
[Close]
BLAST of CF504795 vs. ExPASy Swiss-Prot
Match: EF2_MOUSE (Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 4.846e-42
Identity = 87/124 (70.16%), Postives = 100/124 (80.65%), Query Frame = 3 
Query:   12 MVKFTAEGLRRIMDFKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYEMTDDALKSYKGERNGNEYLINLIDSPGHVDFSSEVTAALRITDG 383
            MV FT + +R IMD K NIRNMSVIAHVDHGKSTLTDSLV  AGIIA   AG+ R TDTR DE ER ITIKST ISL+YE++++ L   K  ++G+ +LINLIDSPGHVDFSSEVTAALR+TDG
Sbjct:    1 MVNFTVDQIRAIMDKKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFYELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDG 124
The following BLAST results are available for this feature:
BLAST of CF504795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EF2_BETVU1.958e-5992.74Elongation factor 2 OS=Beta vulgaris PE=2 SV=1[more]
EF2_CHLKE1.151e-5180.65Elongation factor 2 OS=Chlorella kessleri PE=2 SV=... [more]
EF2_PICPA7.476e-4370.97Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_YEAST9.764e-4370.16Elongation factor 2 OS=Saccharomyces cerevisiae GN... [more]
EF2_SACKL9.764e-4370.97Elongation factor 2 OS=Saccharomyces kluyveri GN=E... [more]
EF2_KLULA1.275e-4270.16Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_SCHPO2.175e-4269.35Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_DEBHA2.841e-4270.97Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_RAT4.846e-4270.16Elongation factor 2 OS=Rattus norvegicus GN=Eef2 P... [more]
EF2_MOUSE4.846e-4270.16Elongation factor 2 OS=Mus musculus GN=Eef2 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-285 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-21_G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504795 ID=CF504795; Name=CF504795; organism=Citrus sinensis; type=EST; length=383bp
AACAAGTCAAGATGGTGAAGTTTACAGCTGAGGGACTCCGTAGGATTATG
GACTTCAAACATAACATCCGTAATATGTCTGTGATTGCTCATGTCGATCA
TGGGAAATCAACTCTTACAGACTCTCTTGTGGCTGCTGCGGGTATCATTG
CACAAGAGGTTGCTGGTGATGTGCGTATGACAGATACTCGTGCTGATGAA
GCTGAGCGTGGTATTACAATCAAGTCTACTGGTATCTCTCTCTACTATGA
GATGACTGATGATGCCCTGAAGAGCTACAAGGGAGAACGTAATGGGAATG
AGTACCTGATCAATCTTATTGATTCCCCTGGGCACGTTGACTTCTCATCT
GAGGTGACAGCTGCTCTTCGTATAACTGATGGT
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