CF504811

Overview
NameCF504811
Unique NameCF504811
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length370
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y4523_ARATH (Probable serine/threonine-protein kinase At4g35230 OS=Arabidopsis thaliana GN=At4g35230 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 4.139e-62
Identity = 110/123 (89.43%), Postives = 115/123 (93.50%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 369
            +VYKGRLQ    NRRWIAVKKFTK AWP+PKQFA+EAWGVGKLRH RLANLIGYCCDGDERLLVAE+MPNDTLAKHLFHWENQTIEWAMRLRV  YIAEALDYCS+EGRPLYHDLNAYRVLFD
Sbjct:   89 LVYKGRLQ----NRRWIAVKKFTKMAWPEPKQFAEEAWGVGKLRHNRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVGYYIAEALDYCSTEGRPLYHDLNAYRVLFD 207          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5126_ARATH (Probable serine/threonine-protein kinase At5g41260 OS=Arabidopsis thaliana GN=At5g41260 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.892e-44
Identity = 81/123 (65.85%), Postives = 106/123 (86.18%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 369
            VVYKG+L+    N+R IAVK+F + +WPD +QF +EA  VG+LR+ R+ANL+G C + +ERLL+AE+MPN+TLAKHLFHWE+Q ++WAMRLRVAL+IA+AL+YC+S+GR LYHDLNAYRVLFD
Sbjct:   72 VVYKGKLE----NQRRIAVKRFNRKSWPDSRQFLEEAKAVGQLRNHRMANLLGCCYEDEERLLIAEFMPNETLAKHLFHWESQPMKWAMRLRVALHIAQALEYCTSKGRALYHDLNAYRVLFD 190          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: SSP_ARATH (Probable inactive receptor-like kinase SSP OS=Arabidopsis thaliana GN=SSP PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 2.887e-39
Identity = 75/123 (60.98%), Postives = 98/123 (79.67%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 369
            VV+KGRLQ+G     ++A+K+F   AW DPK F +EA  VGKLRHKRL NLIGYCCDGD+R LVA++M NDTLAK LF  + QT++W++RLRVA ++AEALDYC++ G   Y++L+AY+VLFD
Sbjct:   63 VVFKGRLQNGG----FVAIKRFNNMAWSDPKLFLEEAQRVGKLRHKRLVNLIGYCCDGDKRFLVADFMANDTLAKRLFQRKYQTMDWSIRLRVAYFVAEALDYCNTAGFASYNNLSAYKVLFD 181          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.484e-16
Identity = 46/108 (42.59%), Postives = 63/108 (58.33%), Query Frame = 1
Query:    1 VVYKGRLQDGNDNRRWIAVKKFTKH--AWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIE---WAMRLRVALYIAEALDY 309
            VVYKG L DG      IAVK+      A     +F  E   + K+RH+ L  L+GYC DG+E+LLV EYMP  TL++HLF W  + ++   W  RL +AL +A  ++Y
Sbjct:  601 VVYKGELHDGTK----IAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEY 704          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.704e-15
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHW--ENQTIEWAMRLRVALYIAEALDYCSSEGRP--LYHDLNAYRVLFD 369
            VYKGRL   +   + +AVK+  ++     ++F  E   +  L H  L NLIGYC DGD+RLLV E+MP  +L  HL     + + ++W MR+++A   A+ L++   +  P  +Y D  +  +L D
Sbjct:  100 VYKGRL---DSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLD 222          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.958e-15
Identity = 39/108 (36.11%), Postives = 62/108 (57.41%), Query Frame = 1
Query:   49 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFD 369
            +AVKK     +   K++  E   +G+L H  L  L+GYC +G+ RLLV E+MP  +L  HLF    Q + WA+R++VA+  A+ L +   ++ + +Y D  A  +L D
Sbjct:  118 VAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLENHLFRRGAQPLTWAIRMKVAIGAAKGLTFLHDAKSQVIYRDFKAANILLD 225          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEGR--PLYHDLNAYRVLFD 369
            VYKG L DG +    +AVK+ +K +     +F +E   V KL+H+ L  L+G+C DG+ER+LV EY+PN +L   LF   +   ++W  R ++   +A  + Y   + R   ++ DL A  +L D
Sbjct:  351 VYKGTLSDGTE----VAVKRLSKSSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLD 471          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.443e-14
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   49 IAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH--WENQTIEWAMRLRVALYIAEALDYC-SSEGRPLYHDLNAYRVLFD 369
            IAVKK  +  W   +++  E   +G+  H+ L  LIGYC + + RLLV E+MP  +L  HLF      Q + W +RL+VAL  A+ L +  SSE R +Y D     +L D
Sbjct:  103 IAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETRVIYRDFKTSNILLD 212          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.214e-14
Identity = 47/130 (36.15%), Postives = 67/130 (51.54%), Query Frame = 1
Query:    1 VVYKGRLQ---DGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCD----GDERLLVAEYMPNDTLAKHLFHWENQTIEWAMRLRVALYIAEALDYCSSEGRPLYHDLNAYRVLFD 369
            +VYKG++    D +D    +A+KK  +      KQ+  E   +G + H  +  LIGYC +    G ERLLV EYM N +L  HLF   + T+ W  RL + L  AE L Y   + + +Y D  +  VL D
Sbjct:   99 IVYKGKILSNGDSSDPPLVVAIKKLNRQGLQGHKQWLAEVQFLGVVNHPNVVKLIGYCSEDGETGIERLLVYEYMSNRSLEDHLFPRRSHTLPWKKRLEIMLGAAEGLTYL-HDLKVIYRDFKSSNVLLD 227          
BLAST of CF504811 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.214e-14
Identity = 46/125 (36.80%), Postives = 70/125 (56.00%), Query Frame = 1
Query:    4 VYKGRLQDGNDNRRWIAVKKFTKHAWPDPKQFADEAWGVGKLRHKRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFH-WENQTIEWAMRLRVALYIAEALDYCSSEG--RPLYHDLNAYRVLFD 369
            VYKG L DG      IAVK+ +K+A     +F +E   V KL+H+ L  L+GY  +G ERLLV E++P+ +L K +F   +   +EW +R ++   +A  L Y   +   R ++ DL A  +L D
Sbjct:  358 VYKGVLSDGQK----IAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLD 478          
The following BLAST results are available for this feature:
BLAST of CF504811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
Y4523_ARATH4.139e-6289.43Probable serine/threonine-protein kinase At4g35230... [more]
Y5126_ARATH3.892e-4465.85Probable serine/threonine-protein kinase At5g41260... [more]
SSP_ARATH2.887e-3960.98Probable inactive receptor-like kinase SSP OS=Arab... [more]
TMK1_ARATH4.484e-1642.59Probable receptor protein kinase TMK1 OS=Arabidops... [more]
PBS1_ARATH1.704e-1534.92Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
APK2B_ARATH4.958e-1536.11Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
CRK10_ARATH1.443e-1435.20Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
APK1A_ARATH1.443e-1439.09Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y5707_ARATH3.214e-1436.15Probable receptor-like protein kinase At5g47070 OS... [more]
CRK26_ARATH3.214e-1436.80Cysteine-rich receptor-like protein kinase 26 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-302 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-22_A04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504811 ID=CF504811; Name=CF504811; organism=Citrus sinensis; type=EST; length=370bp
GTCGTCTATAAAGGCCGCCTTCAAGACGGAAATGATAACCGCCGTTGGAT
CGCCGTTAAAAAATTCACCAAACATGCCTGGCCCGATCCCAAACAGTTTG
CTGATGAGGCTTGGGGTGTTGGGAAGCTGAGGCATAAGAGGCTGGCGAAT
TTGATTGGCTATTGTTGTGATGGTGATGAGAGATTGCTGGTGGCTGAGTA
CATGCCAAATGATACTCTTGCTAAACATTTATTTCACTGGGAGAATCAAA
CCATTGAGTGGGCTATGCGTCTAAGAGTTGCTCTGTATATTGCTGAAGCT
TTAGATTATTGCAGTAGTGAAGGACGTCCATTATACCATGATTTGAATGC
TTATAGGGTTCTCTTTGATG
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