CF504816
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_PONAB (Nucleolar protein 56 OS=Pongo abelii GN=NOP56 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 9.578e-66 Identity = 119/162 (73.46%), Postives = 149/162 (91.98%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERL 488 I++A ++SMG D+SA+DL+N++ F+ RV+ LSEYR+ L+ YL +KM+ +AP+L++LIGE VGARLI+HAGSLTNLAK P+ST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+A+NKGR++RYLANKCSIASRIDCF+E T++FGEKLREQVEERL Sbjct: 244 ILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERL 405
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_MOUSE (Nucleolar protein 56 OS=Mus musculus GN=Nop56 PE=1 SV=2) HSP 1 Score: 248.825 bits (634), Expect = 9.578e-66 Identity = 119/162 (73.46%), Postives = 149/162 (91.98%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERL 488 I++A ++SMG D+SA+DL+N++ F+ RV+ LSEYR+ L+ YL +KM+ +AP+L++LIGE VGARLI+HAGSLTNLAK P+ST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+A+NKGR++RYLANKCSIASRIDCF+E T++FGEKLREQVEERL Sbjct: 244 ILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERL 405
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_MACFA (Nucleolar protein 56 OS=Macaca fascicularis GN=NOP56 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 9.578e-66 Identity = 119/162 (73.46%), Postives = 149/162 (91.98%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERL 488 I++A ++SMG D+SA+DL+N++ F+ RV+ LSEYR+ L+ YL +KM+ +AP+L++LIGE VGARLI+HAGSLTNLAK P+ST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+A+NKGR++RYLANKCSIASRIDCF+E T++FGEKLREQVEERL Sbjct: 244 ILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERL 405
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_HUMAN (Nucleolar protein 56 OS=Homo sapiens GN=NOP56 PE=1 SV=4) HSP 1 Score: 248.825 bits (634), Expect = 9.578e-66 Identity = 119/162 (73.46%), Postives = 149/162 (91.98%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERL 488 I++A ++SMG D+SA+DL+N++ F+ RV+ LSEYR+ L+ YL +KM+ +AP+L++LIGE VGARLI+HAGSLTNLAK P+ST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+A+NKGR++RYLANKCSIASRIDCF+E T++FGEKLREQVEERL Sbjct: 244 ILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERL 405
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_BOVIN (Nucleolar protein 56 OS=Bos taurus GN=NOP56 PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 9.578e-66 Identity = 119/162 (73.46%), Postives = 149/162 (91.98%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERL 488 I++A ++SMG D+SA+DL+N++ F+ RV+ LSEYR+ L+ YL +KM+ +AP+L++LIGE VGARLI+HAGSLTNLAK P+ST+QILGAEKALFRALKTRGNTPKYGLIFHS+FIGRA+A+NKGR++RYLANKCSIASRIDCF+E T++FGEKLREQVEERL Sbjct: 244 ILDASRSSMGMDISAIDLINIESFSSRVVSLSEYRQSLHTYLRSKMSQVAPSLSALIGEAVGARLIAHAGSLTNLAKYPASTVQILGAEKALFRALKTRGNTPKYGLIFHSTFIGRAAAKNKGRISRYLANKCSIASRIDCFSEVPTSVFGEKLREQVEERL 405
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_SCHPO (Nucleolar protein 56 OS=Schizosaccharomyces pombe GN=nop56 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 8.108e-65 Identity = 120/163 (73.62%), Postives = 144/163 (88.34%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLD 491 I+ AGK SMGQD+S +DL N+ FA+RV+ LS YRK+L+ YLV KMN +APNLA LIGE+VGARLISHAGSLTNL+KCP+ST+QILGAEKALFRALKTRGNTPKYG+I+HSSFIG+A A+NKGR++R+LANKCSIASRID F++ TT FG+ LR QVEERL+ Sbjct: 247 IINAGKVSMGQDISEIDLENILSFAERVIKLSNYRKQLHNYLVQKMNVVAPNLAELIGEMVGARLISHAGSLTNLSKCPASTVQILGAEKALFRALKTRGNTPKYGIIYHSSFIGKAGAKNKGRISRFLANKCSIASRIDNFSDAPTTAFGQVLRRQVEERLN 409
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: YZVL_CAEEL (Uncharacterized NOP5 family protein K07C5.4 OS=Caenorhabditis elegans GN=K07C5.4 PE=2 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 5.091e-59 Identity = 109/163 (66.87%), Postives = 139/163 (85.28%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLD 491 I+EA + SMG D+S +DL N++ FA RV L EYR++L+EY+ +M+ AP+L++LIGE VGARLISHAGSLTNLAK P+ST+QILGAEKALFRALKTR NTPKYGL+FHSSFIG+A +NKGR++RYLANKCSIA+R+DCF+E + +GE LR+QVE+RL+ Sbjct: 250 IIEAARTSMGMDISDLDLENIKRFAARVSSLMEYRQQLHEYIKDRMDHCAPSLSALIGEQVGARLISHAGSLTNLAKYPASTVQILGAEKALFRALKTRSNTPKYGLLFHSSFIGKAGTKNKGRVSRYLANKCSIAARVDCFSETPVSTYGEFLRQQVEDRLE 412
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_YEAST (Nucleolar protein 56 OS=Saccharomyces cerevisiae GN=NOP56 PE=1 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 3.300e-58 Identity = 106/163 (65.03%), Postives = 141/163 (86.50%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERLD 491 +++ + SMGQD+S D+ NV +FAQRV L++YR++LY+YL KM+ +APNL+ LIGEV+GARLISHAGSLTNL+K +ST+QILGAEKALFRALKT+GNTPKYGLI+HS FI +ASA+NKGR++RYLANKCS+ASRID ++E+ + +FG L++QVE+RL+ Sbjct: 251 VIDNARISMGQDISETDMENVCVFAQRVASLADYRRQLYDYLCEKMHTVAPNLSELIGEVIGARLISHAGSLTNLSKQAASTVQILGAEKALFRALKTKGNTPKYGLIYHSGFISKASAKNKGRISRYLANKCSMASRIDNYSEEPSNVFGSVLKKQVEQRLE 413
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP56_DICDI (Nucleolar protein 56 OS=Dictyostelium discoideum GN=nop56 PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 8.146e-49 Identity = 96/162 (59.26%), Postives = 127/162 (78.40%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEKNTTIFGEKLREQVEERL 488 ++ A KASMG D+S +DLV V FA RV+ L EYR L +YL KM DIAPNL++L+G+ +GA+LIS AGSLT+LAK P+ST+QILGAEKALFRA+K RG TPKYG+IF++S + + +NKGR+AR L+NK SIA+RIDCF++ T FG L++QV +R+ Sbjct: 243 VLSAAKASMGGDISQIDLVTVMHFADRVISLDEYRTNLTQYLAKKMQDIAPNLSALVGDRIGAKLISRAGSLTSLAKYPASTVQILGAEKALFRAMKVRGKTPKYGIIFNASAVS-SETKNKGRIARCLSNKISIATRIDCFSDNPTAKFGVALKQQVADRI 403
BLAST of CF504816 vs. ExPASy Swiss-Prot
Match: NOP58_PICST (Nucleolar protein 58 OS=Pichia stipitis GN=NOP58 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.878e-45 Identity = 88/164 (53.66%), Postives = 130/164 (79.27%), Query Frame = 3 Query: 3 IVEAGKASMGQDLSAVDLVNVQMFAQRVMDLSEYRKKLYEYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRMARYLANKCSIASRIDCFAEK--NTTIFGEKLREQVEERL 488 + A + SMG +++A+DL N++ A++++D + YR++L YL ++M IAPNL +L+GE+VGARLI+HAGSLT+LAK P+ST+QILGAEKALFRALKT+ +TPKYGL++H+S +G+AS +NKG++AR LA K ++A R D AE+ ++ FG ++R +VE RL Sbjct: 235 VKSAAEVSMGTEITAIDLENIRALAEQIVDFAAYREQLSNYLSSRMKAIAPNLTALVGELVGARLIAHAGSLTSLAKAPASTIQILGAEKALFRALKTKHDTPKYGLLYHASLVGQASGKNKGKIARVLAAKAAVALRYDSLAEERDDSGDFGLEVRAKVESRL 398 The following BLAST results are available for this feature:
BLAST of CF504816 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504816 ID=CF504816; Name=CF504816; organism=Citrus sinensis; type=EST; length=492bpback to top |