CF504958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 1.061e-25 Identity = 54/86 (62.79%), Postives = 62/86 (72.09%), Query Frame = 2 Query: 116 CAGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 C G D G D G L II + F+ LL +RNDARCPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF QT HETTGGW Sbjct: 74 CDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGW 159
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.385e-25 Identity = 49/73 (67.12%), Postives = 61/73 (83.56%), Query Frame = 2 Query: 155 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G++G++I+R MF D+L +RN+ CP +GFYTYDAFI AA+AFPGFG +G+ T RKREIAAF AQT HETTGGW Sbjct: 63 GDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGW 135
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.031e-25 Identity = 50/73 (68.49%), Postives = 59/73 (80.82%), Query Frame = 2 Query: 155 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G+L IISR F+D+L +RND CPARGFYTYDAFI AA++FPGFG +G+ RK+EIAAFF QT HETTGGW Sbjct: 69 GDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGW 141
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.876e-25 Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 152 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW Sbjct: 72 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGW 145
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 6.876e-25 Identity = 50/74 (67.57%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 152 GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 GG+LG IIS MF+ +L +RND C +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW Sbjct: 77 GGDLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGW 150
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 2.613e-24 Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 2 Query: 155 GELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G+L IIS F+D+L +RNDA CPARGFYTY+AFI AA++FPGFG +G+ RK+E+AAFF QT HETTGGW Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGW 156
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.297e-23 Identity = 48/79 (60.76%), Postives = 59/79 (74.68%), Query Frame = 2 Query: 137 GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G G GG + ++S+E+FE LL +RNDA CPARGFYTYDA + AA AFP F +G++ RKRE+AAF QT HETTGGW Sbjct: 78 GGGGGGGAVEAVVSKELFEQLLLHRNDAACPARGFYTYDALVTAAAAFPDFAATGDDEARKREVAAFLGQTSHETTGGW 156
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.773e-23 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 2 Query: 143 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGG 370 GT G I++RE+FE +L +RN+ CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG Sbjct: 21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG 96
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.928e-23 Identity = 46/76 (60.53%), Postives = 61/76 (80.26%), Query Frame = 2 Query: 143 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGG 370 G+ ++G I++ ++F ++L RND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG Sbjct: 13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG 88
BLAST of CF504958 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 4.928e-23 Identity = 49/79 (62.03%), Postives = 57/79 (72.15%), Query Frame = 2 Query: 137 GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGW 373 G G G L II MF+D+L YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF QT HET G W Sbjct: 77 GGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWW 155 The following BLAST results are available for this feature:
BLAST of CF504958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504958 ID=CF504958; Name=CF504958; organism=Citrus sinensis; type=EST; length=373bpback to top |