CF505032

Overview
NameCF505032
Unique NameCF505032
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length343
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.712e-21
Identity = 52/92 (56.52%), Postives = 65/92 (70.65%), Query Frame = 2
Query:   68 LLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG 343
            L V   + GI+G  Q  +L+ NFY +SC +AE IV+     + ++ P L A LIRMHFHDCFVRGCD SVLINST+GN AERDA PNL++ G
Sbjct:    9 LSVSFFLVGIVGPIQA-QLQMNFYANSCPNAEKIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGN-AERDATPNLTVRG 98          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.031e-20
Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 2
Query:  116 GELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNK-AERDAVPNLSLGG 343
            G+L+ NFY +SC  AEDIVR I WK   +N  L  KL+R+H+HDCFVRGCDAS+L++S AG   +E++A PNLSL G
Sbjct:   44 GKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKEARPNLSLSG 120          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.115e-20
Identity = 52/94 (55.32%), Postives = 64/94 (68.09%), Query Frame = 2
Query:   68 LLVCLVVFGIIGVCQGGE--LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG 343
            + V +VV  +IG+ +  E  L+ NFY  SC +AE I+      +  + P L A LIRMHFHDCFVRGCD SVLINST+GN AERDA PNL+L G
Sbjct:    9 IAVVVVVTVLIGMLRSSEAQLQMNFYAKSCPNAEKIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGN-AERDAPPNLTLRG 101          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.149e-18
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 2
Query:   68 LLVCLVVFGIIGVCQGGE--LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG 343
            +L  +V+  ++GV       L  ++YR  C  AE+IVR +T +  +    L AKL+RMHFHDCFVRGCD SVL+ S A N AERDAVPNL+L G
Sbjct:    6 ILALVVLLSVVGVSVAIPQLLDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKS-AKNDAERDAVPNLTLKG 98          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16
Identity = 44/96 (45.83%), Postives = 64/96 (66.67%), Query Frame = 2
Query:   59 GSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGN-KAERDAVPNLSLGG 343
            G  LL+ LV+ G++   +  +L+  FY  +C  AE IV+ +  ++  + P L A LIRMHFHDCFVRGCD S+LIN+T+ N + E+ A PNL++ G
Sbjct:    5 GLALLMILVIQGLVTFSEA-QLKMGFYDQTCPYAEKIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRG 99          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 1.540e-16
Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   56 AGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG 343
            A S +++ L++     +    +L + FY +SC S E +VR    +   + P L   L+RMHFHDCFVRGCD SVL++S   + AE+DA PN +L G
Sbjct:    2 ASSRVILALLLAAAAVMASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRG 97          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 2.012e-16
Identity = 37/91 (40.66%), Postives = 60/91 (65.93%), Query Frame = 2
Query:   71 LVCLVVFGIIGVCQGGE--LRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL 337
            L+  ++F ++ + +  E  L  ++Y  SC +AE I+          +P +PA+L+RM FHDCF+RGCDAS+L++ST  N+AE+D  PN+S+
Sbjct:    7 LIFAMIFAVLAIVKPSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISV 97          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 7.644e-16
Identity = 41/94 (43.62%), Postives = 61/94 (64.89%), Query Frame = 2
Query:   62 SLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG 343
            S+LL+ L +F +       +L+  FY +SC +AE IV ++  +  A +P + A L RMHFHDCFV+GCDAS+LI+ T    +E++A PN S+ G
Sbjct:    7 SVLLLLLFIFPVALA----QLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRG 96          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15
Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 2
Query:   56 AGSLLLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSL 337
            A  L L+ +V+F +    Q   L  ++Y  +C  A+ IV +   K  +++  +PA L+RMHFHDCFVRGCD SVL++S   NKAE+D  PN+SL
Sbjct:    3 AHMLNLLVIVIFVVSFDVQA--LSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISL 94          
BLAST of CF505032 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 8.451e-15
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 2
Query:   68 LLVCLVVFGIIGVCQGGELRKNFYRDSCKSAEDIVRSITWKNAASNPDLPAKLIRMHFHDCFVRGCDASVLINSTAGNKAERDAVPNLSLGG 343
            LL+ L+   +       +LR+NFY  SC + E IVR+   K            +R++FHDCFV GCDASV+I ST  NKAE+D   NLSL G
Sbjct:    9 LLLLLLSLCLTLDLSSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAG 100          
The following BLAST results are available for this feature:
BLAST of CF505032 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PER3_ARATH2.712e-2156.52Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER24_ARATH1.031e-2058.44Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER30_ARATH5.115e-2055.32Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_ARATH2.149e-1851.06Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER39_ARATH1.179e-1645.83Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER1_ORYSJ1.540e-1641.67Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER66_ARATH2.012e-1640.66Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER28_ARATH7.644e-1643.62Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER64_ARATH1.304e-1544.68Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER50_ARATH8.451e-1544.57Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-525 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF505032 ID=CF505032; Name=CF505032; organism=Citrus sinensis; type=EST; length=343bp
GTTAAACTCATTTCTCTTAGTAACTAGTGAATTAAAGATGAAGAAAGCCG
CTGGGGCTGGGTCTCTTTTGTTAGTTTGCTTAGTAGTTTTTGGTATTATA
GGGGTTTGCCAAGGAGGTGAGCTAAGGAAGAATTTCTACAGGGACAGCTG
TAAATCTGCTGAAGATATCGTCAGGAGCATCACCTGGAAAAATGCCGCCA
GTAACCCTGACTTGCCGGCCAAGCTTATCAGAATGCATTTCCATGACTGC
TTTGTTAGGGGTTGCGATGCGTCGGTTTTGATAAACTCAACTGCAGGTAA
CAAAGCAGAGAGGGATGCAGTTCCGAATCTATCTTTGGGAGGT
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