CF505040

Overview
NameCF505040
Unique NameCF505040
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length489
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF505040 vs. ExPASy Swiss-Prot
Match: EI2BB_DICDI (Translation initiation factor eIF-2B subunit beta OS=Dictyostelium discoideum GN=eif2b2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 3 
Query:   45 LHVVNPAFDYVPPKLVSLFITDAGGHNPSYMYRLIADYYSADDLV 179
            +H  NP FDYV P LVSLFIT+ GGHNPSY+YRL+ +YY A D++
Sbjct:  341 VHSYNPTFDYVAPDLVSLFITNIGGHNPSYIYRLLQEYYDARDIL 385
The following BLAST results are available for this feature:
BLAST of CF505040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
EI2BB_DICDI1.334e-1164.44Translation initiation factor eIF-2B subunit beta ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-533 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF505040 ID=CF505040; Name=CF505040; organism=Citrus sinensis; type=EST; length=489bp
TCTCAGACTGCATGGATTTTGGGAGTGGCAGTGGTTCCCCTCTTCTTCAT
GTGGTCAATCCAGCATTTGACTATGTTCCACCGAAACTTGTTAGTCTTTT
TATTACTGACGCGGGAGGGCACAATCCTTCATACATGTATCGGTTGATTG
CTGATTATTACTCGGCTGATGACTTGGTTGTGCAGCGAAGAGCTACTGCT
GGGAATTGATTTTGGTTTGTATCATCTATTGTGTCAGGAATTTATTACGG
CAAGAGCATTAGCTTTGGGTTTGAGAAATTTCAAATCACTGAATTTGGAG
CTGAGCTGATGCTGTAAAAGAACTCAGGGACATAGCGATTGCGAGGCAAT
GGTGTGAACTTGTGCAAATTTTAGGGACCAAACAATGATAGGATAATTTT
TTGTTGGCAGAAATATTAAAATGTAAAATAGAGGCTAAGAGTTGTACTGA
GATAAAAAGGTGGATACGGGTAGATAATATTTTTTGATT
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