CF505044

Overview
NameCF505044
Unique NameCF505044
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length449
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.749e-46
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPK AFRTK FHPNINSNGSICLDILK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.284e-46
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPYAGGVFLV+IHFPPDYPFKPPK AFRTK FHPNINSNGSICLDILK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.284e-46
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP DSPY+GGVFLVTIHFPPDYPFKPPK AFRTK FHPN+NSNGSICLDILK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.284e-46
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPYAGGVFLVTIHFPPDYPFKPPK AFRTK FHPNINSNGSICLDILK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 5.088e-46
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP +SPY+GGVFLVTIHFPPDYPFKPPK AFRTK FHPNINSNGSICLDILK
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 5.625e-45
Identity = 81/90 (90.00%), Postives = 88/90 (97.78%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP+SPYAGGVFLV+IHFPPDYPFKPPK +F+TK +HPNINSNGSICLDILK
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 9.929e-42
Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP DSP+AGGVFLVTIHFPPDYPFKPPK AFRTK +HPNINSNGSICLDILK
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.694e-41
Identity = 75/90 (83.33%), Postives = 82/90 (91.11%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MA++RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP +SPY+GGVFLV IHFPPDYPFKPPK  FRTK FHPNINSNG+ICLDILK
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILK 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.990e-38
Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MA KRI KEL+DL +DPP  CSAGPV +D+FHWQATIMGPPDSPY GGVF +TIHFP DYPFKPPK AF T+ +HPNINSNGSICLDIL+
Sbjct:    1 MALKRINKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR 90          
BLAST of CF505044 vs. ExPASy Swiss-Prot
Match: UB2D4_HUMAN (Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 2.990e-38
Identity = 71/90 (78.89%), Postives = 77/90 (85.56%), Query Frame = 1
Query:  178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKGAFRTKGFHPNINSNGSICLDILK 447
            MA KRI KEL DLQ+DPP  CSAGPV +D+FHWQATIMGP DSPY GGVF +TIHFP DYPFKPPK AF TK +HPNINSNGSICLDIL+
Sbjct:    1 MALKRIQKELTDLQRDPPAQCSAGPVGDDLFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR 90          
The following BLAST results are available for this feature:
BLAST of CF505044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 201
Match NameE-valueIdentityDescription
UBC9_ARATH1.749e-4695.56SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC4_SOLLC2.284e-4695.56Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC28_ARATH2.284e-4694.44Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC10_ARATH2.284e-4695.56Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC8_ARATH5.088e-4694.44Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC11_ARATH5.625e-4590.00Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH9.929e-4285.56Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH1.694e-4183.33Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBCD1_DROME2.990e-3877.78Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UB2D4_HUMAN2.990e-3878.89Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-537 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-25_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF505044 ID=CF505044; Name=CF505044; organism=Citrus sinensis; type=EST; length=449bp
CAAAGGCAAGAGATTGTAGAGGAGAGAGGTCGGGACGGCCAGTAGCCGCC
GCAGATCTGCTCCGAAGCCGTTCCCCTTTCTCACTGCTATTGCCCTCCGA
TCTCCTTCTTCGCCGCACAAGTGTTGCAGATCCTAGGTTTGTTGTGGCTT
TAACTTTTAATAATCCGTTGAAGCATCATGGCTTCGAAGCGTATTTTGAA
GGAACTCAAGGATTTGCAGAAGGATCCTCCCACGTCTTGCAGCGCTGGTC
CGGTGGCTGAAGACATGTTCCATTGGCAAGCAACAATTATGGGCCCCCCT
GATAGTCCATATGCAGGAGGTGTATTTTTGGTTACCATTCATTTTCCTCC
AGATTATCCCTTCAAGCCCCCAAAGGGTGCTTTTAGGACCAAGGGCTTCC
ACCCAAACATCAACAGCAATGGAAGCATATGTCTTGATATCCTTAAAGA
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