CF505047
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF505047 vs. ExPASy Swiss-Prot
Match: CLH1_CITUN (Chlorophyllase-1, chloroplastic OS=Citrus unshiu PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 1.449e-37 Identity = 85/146 (58.22%), Postives = 100/146 (68.49%), Query Frame = 2 Query: 17 MTALADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGH 445 M A+ DSKP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P EKGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGH Sbjct: 1 MAAMVDSKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAEKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGH 146
BLAST of CF505047 vs. ExPASy Swiss-Prot
Match: CLH1_CITSI (Chlorophyllase-1, chloroplastic OS=Citrus sinensis GN=CHLASE1 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 2.093e-36 Identity = 83/146 (56.85%), Postives = 99/146 (67.81%), Query Frame = 2 Query: 17 MTALADSKPV-SVEAKPGLATALLSVFSSGPYSPKLKTVNKPWFNSFPP-KPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFL-PPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGH 445 M A+ D+KP SV+ P LATA L VF+ G YS K T+ +S PP KPL IV P KGT+ VILF HGT+LSN SYS + DH+ASHG+IVVAPQLY + PP E+N AA V WL GLQ LPEN EAN++ VA+MGH Sbjct: 1 MAAMVDAKPAASVQGTPLLATATLPVFTRGIYSTKRITLETSSPSSPPPPKPLIIVTPAGKGTFNVILFLHGTSLSNKSYSKIFDHIASHGFIVVAPQLYTSIPPPSATNELNSAAEVAEWLPQGLQQNLPENTEANVSLVAVMGH 146
BLAST of CF505047 vs. ExPASy Swiss-Prot
Match: CLH1_ARATH (Chlorophyllase-1 OS=Arabidopsis thaliana GN=CLH1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.460e-26 Identity = 54/97 (55.67%), Postives = 69/97 (71.13%), Query Frame = 2 Query: 155 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGH 445 PPKP+ I P GTY V+LFFHG L N YS++L+H+ASHGYI+VAPQL LPP G EV+DA +V+NW S L++ LP +V AN Y +L+GH Sbjct: 41 PPKPVRITCPTVAGTYPVVLFFHGFYLRNYFYSDVLNHIASHGYILVAPQLCKLLPPGGQVEVDDAGSVINWASENLKAHLPTSVNANGKYTSLVGH 137
BLAST of CF505047 vs. ExPASy Swiss-Prot
Match: CLH2_ARATH (Chlorophyllase-2, chloroplastic OS=Arabidopsis thaliana GN=CLH2 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 5.178e-19 Identity = 43/97 (44.33%), Postives = 59/97 (60.82%), Query Frame = 2 Query: 155 PPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPKGNGEVNDAANVLNWLSTGLQSELPENVEANLNYVALMGH 445 PPK L + P E+G Y V++ HG L N+ YS L+ H++SHG+I++APQLY P E+ A +++WLS GL LP V NL+ AL GH Sbjct: 41 PPKQLLVATPVEEGDYPVVMLLHGYLLYNSFYSQLMLHVSSHGFILIAPQLYSIAGPDTMDEIKSTAEIMDWLSVGLNHFLPAQVTPNLSKFALSGH 137
BLAST of CF505047 vs. ExPASy Swiss-Prot
Match: CLH0_CHEAL (Chlorophyllase type 0 OS=Chenopodium album GN=CACLH PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.570e-18 Identity = 50/128 (39.06%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 80 LLSVFSSGPYSPKLKTVNKPWFNSFPPKPLNIVYPEEKGTYEVILFFHGTALSNTSYSNLLDHLASHGYIVVAPQLYDFLPPK---GNGEVNDAANVLNWLSTGLQSELPE---NVEANLNYVALMGH 445 + VF G + + + P+PL I+ P+E G Y V+LF HGT LSN YS +++ASHG+IVVAP+L+ PPK E++ AA+V NW+ LQ L VE +L +A+ GH Sbjct: 34 ITDVFHKGNFQVTNNPIRVKRYEFSAPEPLIIISPKEAGVYPVLLFIHGTMLSNEDYSLFFNYIASHGFIVVAPKLFRLFPPKLPSQQDEIDMAASVANWMPLYLQVVLQRYVTGVEGDLEKLAISGH 161 The following BLAST results are available for this feature:
BLAST of CF505047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF505047 ID=CF505047; Name=CF505047; organism=Citrus sinensis; type=EST; length=445bpback to top |