CF505268

Overview
NameCF505268
Unique NameCF505268
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length375
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.079e-33
Identity = 74/125 (59.20%), Postives = 89/125 (71.20%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + EI+ K GPGA L  SDIA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY
Sbjct:   40 ELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEY 164          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.528e-32
Identity = 70/125 (56.00%), Postives = 91/125 (72.80%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + E++ K GPGA +  S++AAQL T+N DAP+MLDRILRLLASYSV+ C+L      G  RLYSL  V K+   N+DGV +  L+ + QDKV ++SW  LKDA+LEGGIPFN+A+G+  FEY
Sbjct:   41 ELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEY 165          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.607e-32
Identity = 73/125 (58.40%), Postives = 89/125 (71.20%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + EI+ K GPGA L  SDIA+ L TKN +AP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY
Sbjct:   40 ELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEY 164          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.607e-32
Identity = 72/125 (57.60%), Postives = 88/125 (70.40%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDAILEGGIPFN+A+G+  FEY
Sbjct:   41 ELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEY 165          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.807e-32
Identity = 71/125 (56.80%), Postives = 88/125 (70.40%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + EI+ K GPGA L  S+IA+ L TKN DAP+MLDRILRLLASYS++ CSL         RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDAIL+GGIPFN+A+G+  FEY
Sbjct:   41 ELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEY 165          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 5.807e-32
Identity = 67/125 (53.60%), Postives = 90/125 (72.00%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + E++ K GPGA +  S++AAQL T N +AP+MLDRILRLLA+YSV++C L+     G  RLY L  V K+   N DGV + PL+ + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY
Sbjct:   28 ELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEY 152          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.294e-31
Identity = 69/125 (55.20%), Postives = 89/125 (71.20%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + EI+ + GPGA L   ++A+QL T+N DAP+MLDRI RLLASYSV+ C+L         RLY L  + K+ V N+DGV L PL  I QD+VFL+SW  +KDAILEGGIPF++AHG+  F+Y
Sbjct:   23 ELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDY 147          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.764e-31
Identity = 71/125 (56.80%), Postives = 89/125 (71.20%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLD--ASG-ARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + EI+ K GPG  L  +DIA+QL TKN DAP+MLDR+LRLLASYS++  SL   A G   RLY L  V K+   N++GV + PL  + QDKV L+SW  LKDA+LEGGIPFN+A+G+  FEY
Sbjct:   41 ELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEY 165          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 1.095e-30
Identity = 66/125 (52.80%), Postives = 88/125 (70.40%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + EI+ K GPGA +  S++AAQL TKN +AP+MLDR+LRLLA+YSV+ C+L         RLYSL  V K    N DGV + PL+ + QDKV ++SW  L DA+L+GG+PFN+A+G+  FEY
Sbjct:   37 ELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEY 161          
BLAST of CF505268 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.162e-30
Identity = 64/125 (51.20%), Postives = 88/125 (70.40%), Query Frame = 2
Query:    8 ELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLIQIVQDKVFLKSWSQLKDAILEGGIPFNRAHGVHVFEY 373
            EL + E++ K G GA +  +++AAQLLT N +A +MLDRILRLL SY+++EC L      G +RLY L  V K+   N+DGV + PL  + QDKV ++SW  LKDA+L+GGIPFN+A+G+  FEY
Sbjct:   39 ELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEY 163          
The following BLAST results are available for this feature:
BLAST of CF505268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT3_POPKI3.079e-3359.20Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CATRO1.528e-3256.00Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT2_POPTM2.607e-3258.40Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_POPKI2.607e-3257.60Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM5.807e-3256.80Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_COFCA5.807e-3253.60Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_EUCGL1.294e-3155.20Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_PRUDU3.764e-3156.80Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CAPAN1.095e-3052.80Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT2_OCIBA4.162e-3051.20Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-763 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-2_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF505268 ID=CF505268; Name=CF505268; organism=Citrus sinensis; type=EST; length=375bp
GGTGTATGAGCTAGGCATTTTCGAGATCCTAGACAAAGTTGGTCCTGGTG
CAAAGCTCTGTGCTTCAGATATTGCAGCCCAATTGCTCACCAAGAACAAA
GACGCACCCATGATGCTGGATCGGATTCTCAGGCTTCTGGCTAGCTACAG
CGTTGTTGAATGCTCACTTGATGCTTCTGGTGCCCGGAGACTATATAGTT
TGAATTCTGTCTCCAAATACTATGTGCCTAACAAAGATGGCGTCTTACTA
GGACCCCTAATACAAATAGTTCAGGACAAGGTCTTTCTGAAGAGCTGGTC
CCAACTCAAAGATGCTATTCTTGAAGGAGGAATTCCATTTAATCGAGCCC
ATGGAGTGCATGTATTTGAGTACGC
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