CF508730

Overview
NameCF508730
Unique NameCF508730
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PALY_CAMSI (Phenylalanine ammonia-lyase OS=Camellia sinensis GN=PAL PE=2 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 8.575e-100
Identity = 178/190 (93.68%), Postives = 189/190 (99.47%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLI+VSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKLMFAQFSELVNDFY+NGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSSTYL+ALCQA+DLRH EENL++TVKST+SQVAK+VLTMGVNGELHPSRFCEKDLL
Sbjct:  376 INSVNDNPLINVSRNKALHGGNFQGTPIGVSMDNTRLAVASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTYLVALCQAVDLRHFEENLRNTVKSTVSQVAKRVLTMGVNGELHPSRFCEKDLL 565
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PALY_CITLI (Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL6 PE=2 SV=1)

HSP 1 Score: 359.377 bits (921), Expect = 7.259e-99
Identity = 177/190 (93.16%), Postives = 189/190 (99.47%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFSELVNDFY+NGLPSNL+GGRNPSLDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGL S+RKTAEAVDILKLMSST+L+ALCQAIDLRHLEENLK+TVK+T+SQVAK+VLTMGVNGELHPSRFCEKDL+
Sbjct:  382 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLNSSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLI 571
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PAL1_PRUAV (Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=PAL1 PE=2 SV=1)

HSP 1 Score: 357.066 bits (915), Expect = 3.603e-98
Identity = 176/190 (92.63%), Postives = 188/190 (98.95%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            I+SVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFSELVNDFY+NGLPSNLSGGRNPSLDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAVDILKLMSST+L+ALCQAIDLRHLEENL++TVK+T+SQVAK+ LT GVNGELHPSRFCEKDLL
Sbjct:  379 IDSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLL 568
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PALY_PERAE (Phenylalanine ammonia-lyase OS=Persea americana GN=PAL PE=2 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 4.705e-98
Identity = 176/190 (92.63%), Postives = 188/190 (98.95%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKALHG NFQGTPIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAV+ILKLMSST+L+ LCQAIDLRHLEENLKSTVK+T+SQVAK+VLT+GVNGELHPSRFCEKDL+
Sbjct:  282 INSVNDNPLIDVSRNKALHGRNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVGLCQAIDLRHLEENLKSTVKNTVSQVAKRVLTIGVNGELHPSRFCEKDLI 471
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 6.145e-98
Identity = 174/190 (91.58%), Postives = 189/190 (99.47%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKA+HGGNFQG+PIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNPSLDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKT+EAV+ILKLMS+T+L+ LCQAIDLRHLEENLKSTVK+T+SQVAK+VLTMGVNGELHPSRFCEKDLL
Sbjct:  380 INSVNDNPLIDVSRNKAIHGGNFQGSPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVEILKLMSTTFLVGLCQAIDLRHLEENLKSTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLL 569
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 8.026e-98
Identity = 174/190 (91.58%), Postives = 188/190 (98.95%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNPSLDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKT+EAV+ILKLMS+T+L+ LCQAIDLRHLEENLKSTVK+T+S VAK+VLTMGVNGELHPSRFCEKDLL
Sbjct:  378 INSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVEILKLMSTTFLVGLCQAIDLRHLEENLKSTVKNTVSSVAKRVLTMGVNGELHPSRFCEKDLL 567
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PAL1_DAUCA (Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=PAL1 PE=3 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.048e-97
Identity = 174/190 (91.58%), Postives = 187/190 (98.42%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKA+HGGNFQGTPIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNPSLDYGFKGAEIAMA+YCSELQFL NPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAV+ILKLMS+T+L+ LCQA+DLRHLEENLKSTVK+T+SQVAKKVLTMGVNGELHPSRFCE DLL
Sbjct:  370 INSVNDNPLIDVSRNKAIHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTFLVGLCQAVDLRHLEENLKSTVKNTVSQVAKKVLTMGVNGELHPSRFCELDLL 559
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PALY_VITVI (Phenylalanine ammonia-lyase (Fragment) OS=Vitis vinifera GN=PAL PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 1.369e-97
Identity = 175/190 (92.11%), Postives = 185/190 (97.37%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSG RNPSLDYGFKGAEIAMA+YCSELQFLANPVTNHV+SAEQHNQDVNSLGLIS+RKTAEAVDILKLMS+TYL+ALCQAIDLRHLEENLKSTVK T+S VAKK LT+G NGELHPSRFCEKDLL
Sbjct:   78 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGSRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVESAEQHNQDVNSLGLISSRKTAEAVDILKLMSTTYLVALCQAIDLRHLEENLKSTVKKTVSHVAKKTLTIGANGELHPSRFCEKDLL 267
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 1.788e-97
Identity = 173/190 (91.05%), Postives = 188/190 (98.95%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKA+HGGNFQGTPIG+SMDN+RLAIA+IGKLMFAQFSELVNDFY+NGLPSNLSGGRNPSLDYGFKGAEIAMA+YCSELQFLANPVTNHVQSAEQHNQDVNSLGLIS+RKT+EAV+ILKLMS+T+L+ LCQAIDLRHLEENLKSTVK+T+S VAK+VLTMGVNGELHPSRFCEKDLL
Sbjct:  378 INSVNDNPLIDVSRNKAIHGGNFQGTPIGMSMDNTRLAIAAIGKLMFAQFSELVNDFYNNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTSEAVEILKLMSTTFLVGLCQAIDLRHLEENLKSTVKNTVSSVAKRVLTMGVNGELHPSRFCEKDLL 567
[Close]
BLAST of CF508730 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 1.788e-97
Identity = 174/190 (91.58%), Postives = 188/190 (98.95%), Query Frame = 1 
Query:    1 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPSLDYGFKGAEIAMAAYCSELQFLANPVTNHVQSAEQHNQDVNSLGLISARKTAEAVDILKLMSSTYLIALCQAIDLRHLEENLKSTVKSTISQVAKKVLTMGVNGELHPSRFCEKDLL 570
            INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFSELVNDFY+NGLPSNL+G RNPSLDYGFKGAEIAMA+YCSELQ+LANPVTNHVQSAEQHNQDVNSLGLIS+RKTAEAV+ILKLMSST+L+ALCQAIDLRH+EENLKS VK+T+SQVAK+VLT+GVNGELHPSRFCEKDLL
Sbjct:  380 INSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHIEENLKSVVKNTVSQVAKRVLTVGVNGELHPSRFCEKDLL 569
The following BLAST results are available for this feature:
BLAST of CF508730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 191
Match NameE-valueIdentityDescription
PALY_CAMSI8.575e-10093.68Phenylalanine ammonia-lyase OS=Camellia sinensis G... [more]
PALY_CITLI7.259e-9993.16Phenylalanine ammonia-lyase OS=Citrus limon GN=PAL... [more]
PAL1_PRUAV3.603e-9892.63Phenylalanine ammonia-lyase 1 OS=Prunus avium GN=P... [more]
PALY_PERAE4.705e-9892.63Phenylalanine ammonia-lyase OS=Persea americana GN... [more]
PAL3_PETCR6.145e-9891.58Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PAL1_PETCR8.026e-9891.58Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL1_DAUCA1.048e-9791.58Phenylalanine ammonia-lyase 1 OS=Daucus carota GN=... [more]
PALY_VITVI1.369e-9792.11Phenylalanine ammonia-lyase (Fragment) OS=Vitis vi... [more]
PAL2_PETCR1.788e-9791.05Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL2_CICAR1.788e-9791.58Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_124000-233 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-70_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF508730 ID=CF508730; Name=CF508730; organism=Citrus sinensis; type=EST; length=572bp
ATTAACTCTGTGAATGATAATCCGTTGATTGATGTTTCAAGGAACAAGGC
ATTACACGGTGGCAATTTCCAGGGCACCCCAATTGGTGTCTCTATGGATA
ATTCAAGATTGGCAATTGCTTCGATTGGGAAACTCATGTTTGCTCAATTT
TCTGAGCTGGTTAATGATTTTTACAGTAATGGGTTGCCTTCAAATCTGTC
TGGTGGTAGGAATCCAAGCTTGGATTATGGGTTCAAAGGTGCCGAAATAG
CAATGGCTGCGTATTGTTCCGAGCTCCAGTTTCTAGCCAATCCTGTGACT
AATCACGTCCAAAGTGCTGAGCAACACAACCAAGATGTGAACTCTTTAGG
GCTGATCTCTGCCAGAAAAACAGCTGAAGCTGTTGATATCTTGAAGCTCA
TGTCCTCAACTTACTTGATTGCACTCTGCCAAGCTATAGACTTGAGGCAC
TTGGAGGAGAATCTGAAGAGCACAGTTAAGAGCACAATCAGCCAAGTAGC
TAAGAAAGTCCTGACCATGGGGGTCAATGGGGAGCTCCATCCTTCAAGAT
TCTGCGAGAAAGATTTGCTGAA
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