CF508753
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 3.029e-45 Identity = 89/115 (77.39%), Postives = 98/115 (85.22%), Query Frame = 3 Query: 138 MSFRGLSRPNATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 MSFRGL NA+SGMGVADHSKN F EL+RKK HRYVIFKID TGGPAES+++FAAALPENDCRYAVYDFD+VTSENCQKSKIFFIAW+P +SRIRAKMLYATSK+ Sbjct: 1 MSFRGL---NASSGMGVADHSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKE 112
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 3.955e-45 Identity = 86/115 (74.78%), Postives = 94/115 (81.74%), Query Frame = 3 Query: 138 MSFRGLSRPNATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 MSFRGLSRPNA SGMGVAD SK F ELQRKK HRYV+FKID TG P ESY+DF A+LP+NDCRYAVYDFD+VTSENCQKSKIFF AW+PSTS IRAK+LY+TSKD Sbjct: 1 MSFRGLSRPNAISGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKD 115
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.324e-37 Identity = 73/109 (66.97%), Postives = 84/109 (77.06%), Query Frame = 3 Query: 156 SRPNATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 SR NA+SG+GVA K F ELQRKK HRYVIFKID TG ES++DF +LPE+DCRYA+YDFD+VT ENCQKSKIFF+AW+PS SRIRAKMLYATSK+ Sbjct: 6 SRANASSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKE 114
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 7.477e-36 Identity = 73/109 (66.97%), Postives = 83/109 (76.15%), Query Frame = 3 Query: 156 SRPNATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 S NA+SGMGVA ++ F ELQ KK RYVIFKI+ TG ESY+DF A+LPENDCRYA+YDFD+VT EN QKSKIFFIAW+PSTSRIRAKMLY+TSKD Sbjct: 6 SHSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKD 114
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.194e-33 Identity = 64/106 (60.38%), Postives = 81/106 (76.42%), Query Frame = 3 Query: 165 NATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 NA SGM V D K F EL+ K+ HR++++KI+ G P ESYEDFAA+LPEN+CRYAVYDFD+VT+ENCQKS+IFFIAW P T+R+R+KM+YA+SKD Sbjct: 3 NAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKD 108
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 8.555e-32 Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 165 NATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 N+ SGM V+D K F EL+ K+ +R+++FKID G P E+YEDF ++PE++CRYAVYD+D+ T ENCQKSKIFFIAW+P TSR+R+KMLYA+SKD Sbjct: 3 NSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKD 108
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 2.489e-31 Identity = 61/106 (57.55%), Postives = 77/106 (72.64%), Query Frame = 3 Query: 165 NATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 N+ SGM V D K F EL+ K+ R+++FKI+ G P ESY+DF A LP ++CRYAV+DFD+VT ENCQKSKIFFI+WAP TSR+R+KMLYA+SKD Sbjct: 3 NSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKD 108
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 3.251e-31 Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 165 NATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 NA SGM V D K F EL+ K+ +R++I+KID G P +Y+DFAA+LP N+CRYA++D+D+VT ENCQKSKIFFIAW+P TSR+R+KM+YA+SKD Sbjct: 3 NAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKD 108
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 7.242e-31 Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 3 Query: 165 NATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSKD 482 N+ SGM V D K F EL+ K+ +R+++FKID G P E+Y+DF +++P+++CRYAVYDFD+ T +NCQKSKIFFIAW+P TSR+R+KMLYA+SKD Sbjct: 3 NSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKD 108
BLAST of CF508753 vs. ExPASy Swiss-Prot
Match: ADF5_ORYSJ (Actin-depolymerizing factor 5 OS=Oryza sativa subsp. japonica GN=ADF5 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.613e-30 Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 3 Query: 168 ATSGMGVADHSKNAFTELQRKKGHRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWAPSTSRIRAKMLYATSK 479 AT GM V + + F E++ KK HR+V++KID GGP E YE+ AALP +DCRYAV+DFD+VT +NCQKSKIFFIAW+P+ SRIRAK+LYATSK Sbjct: 8 ATEGMNVKEECQRWFMEMKWKKVHRFVVYKIDERSRAVLVDKVGGPGEGYEELVAALPTDDCRYAVFDFDFVTVDNCQKSKIFFIAWSPTASRIRAKILYATSK 111 The following BLAST results are available for this feature:
BLAST of CF508753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF508753 ID=CF508753; Name=CF508753; organism=Citrus sinensis; type=EST; length=484bpback to top |