CF509539

Overview
NameCF509539
Unique NameCF509539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length369
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1840 contig Csv1_Contig1840:1179..1547. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 1.295e-55
Identity = 104/122 (85.25%), Postives = 108/122 (88.52%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+ TGKYEKKVYVLPKHLDEKV            T+LTK+QADYISV
Sbjct:  351 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERKTGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLTKDQADYISV 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.691e-55
Identity = 104/122 (85.25%), Postives = 109/122 (89.34%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV            T+L+K+QADYISV
Sbjct:  351 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISV 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 1.691e-55
Identity = 104/122 (85.25%), Postives = 109/122 (89.34%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV            T+L+K+QADYISV
Sbjct:  351 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISV 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.208e-55
Identity = 102/122 (83.61%), Postives = 109/122 (89.34%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDMLGLETYPGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV            T+LTK+Q+DY+S+
Sbjct:  351 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKDQSDYVSI 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 8.392e-55
Identity = 102/122 (83.61%), Postives = 109/122 (89.34%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDMLGLET+PGVKRITIKPQTDRWVFPETN+GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV            T+L+K+QADYISV
Sbjct:  351 FDNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLEKLGAKLTKLSKDQADYISV 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 2.442e-54
Identity = 102/122 (83.61%), Postives = 108/122 (88.52%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDM GLETYPGVKRITIKPQTDRWVFPET SGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQ+ELWKEK++GKYEKKVYVLPKHLDEKV            T+L+K+QADYISV
Sbjct:  351 FDNEIDMHGLETYPGVKRITIKPQTDRWVFPETKSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQIELWKEKTSGKYEKKVYVLPKHLDEKVAALHLGQLGAKLTKLSKDQADYISV 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 4.165e-54
Identity = 101/122 (82.79%), Postives = 107/122 (87.70%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDMLGLETYPGVKRITIKPQTDRWVFP+T  GII+LAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EKS+GKYEKKVYVLPKHLDEKV            T+L+K+QADYISV
Sbjct:  351 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPDTGRGIIILAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKSSGKYEKKVYVLPKHLDEKVAALHLGKLGAKLTKLSKDQADYISV 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 7.104e-54
Identity = 99/122 (81.15%), Postives = 108/122 (88.52%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDMLGLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV            T+L+K+Q+DY+S+
Sbjct:  351 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETKAGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVALLHLGKLGARLTKLSKDQSDYVSI 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_SOLLC (Adenosylhomocysteinase OS=Solanum lycopersicum GN=SAHH PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.212e-53
Identity = 101/122 (82.79%), Postives = 107/122 (87.70%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDM GLET+PGVKRITIKPQTDRWVFP+TNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW E+S+GKYEKKVYVLPKHLDEKV            T+LTK+QADYI V
Sbjct:  351 FDNEIDMHGLETFPGVKRITIKPQTDRWVFPDTNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNERSSGKYEKKVYVLPKHLDEKVAALHLGKFGAKLTKLTKDQADYIYV 472
[Close]
BLAST of CF509539 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.067e-53
Identity = 100/122 (81.97%), Postives = 106/122 (86.89%), Query Frame = 2 
Query:    2 FDNEIDMLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXXTRLTKEQADYISV 367
            FDNEIDM GLETYPGVKRITIKPQTDRWVFPET +GIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELW EK++GKYEKKVYVLPKHLDEKV            T+LTK Q+DYIS+
Sbjct:  351 FDNEIDMNGLETYPGVKRITIKPQTDRWVFPETKTGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWNEKASGKYEKKVYVLPKHLDEKVAALHLGKLGARLTKLTKSQSDYISI 472
The following BLAST results are available for this feature:
BLAST of CF509539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
SAHH_CATRO1.295e-5585.25Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_TOBAC1.691e-5585.25Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY1.691e-5585.25Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]
SAHH2_ARATH2.208e-5583.61Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_LUPLU8.392e-5583.61Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_MEDSA2.442e-5483.61Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_PETCR4.165e-5482.79Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH1_ARATH7.104e-5481.15Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH_SOLLC1.212e-5382.79Adenosylhomocysteinase OS=Solanum lycopersicum GN=... [more]
SAHH_WHEAT2.067e-5381.97Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-047 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_D07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509539 ID=CF509539; Name=CF509539; organism=Citrus sinensis; type=EST; length=369bp
CTTTGATAATGAAATTGATATGCTCGGTCTTGAGACCTACCCGGGTGTTA
AGCGCATTACCATCAAGCCCCAAACTGATAGGTGGGTCTTCCCGGAGACC
AACTCAGGCATCATCGTGTTGGCTGAGGGACGTCTCATGAACTTGGGATG
TGCCACTGGACACCCCAGCTTTGTGATGTCCTGCTCCTTCACCAACCAGG
TGATTGCCCAGCTTGAGCTCTGGAAGGAGAAGAGCACCGGCAAGTACGAG
AAGAAGGTGTACGTTCTGCCCAAGCACCTCGATGAAAAGGTTGCTGCTCT
TCACCTTGGCAAACTTGGAGCTAAGCTCACCAGGCTCACCAAGGAGCAGG
CTGACTACATCAGTGTGTC
back to top