CF509549

Overview
NameCF509549
Unique NameCF509549
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7390 contig Csv1_Contig7390:516..974. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF509549 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 6.857e-41
Identity = 84/137 (61.31%), Postives = 104/137 (75.91%), Query Frame = 1 
Query:   49 MILANGVFDGEGLVADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKA 459
            MILAN   +GE LVAD H+LPAT+VG  +GD IR Y+ +        TA+I   GT V V+P+PVVA+FS+RGPN  TP ILKPD+IAPG+NILAAW    GP+G+ +D R+ EFNI+SGTSM+CPHVSGLAALLK+
Sbjct:  425 MILANTAANGEELVADAHLLPATTVGEKAGDIIRHYVTTDPNP----TASISILGTVVGVKPSPVVAAFSSRGPNSITPNILKPDLIAPGVNILAAWTGAAGPTGLASDSRRVEFNIISGTSMSCPHVSGLAALLKS 557
[Close]
BLAST of CF509549 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 7.616e-24
Identity = 60/123 (48.78%), Postives = 83/123 (67.48%), Query Frame = 1 
Query:   91 ADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLKA 459
            A   + PATSV ++ GD I +YI S        +A+ V + TR    PAP VASFS+RGPNP +  +LKPD+ APG++ILAA+  K   +G+  D + ++F ILSGTSMACPHV+G+AA +K+
Sbjct:  435 AQIFMAPATSVNSSVGDIIYRYINSTR------SASAVIQKTRQVTIPAPFVASFSSRGPNPGSIRLLKPDIAAPGIDILAAFTLKRSLTGLDGDTQFSKFTILSGTSMACPHVAGVAAYVKS 551
[Close]
BLAST of CF509549 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.109e-20
Identity = 53/122 (43.44%), Postives = 74/122 (60.66%), Query Frame = 1 
Query:   91 ADCHVLPATSVGAASGDEIRKYIMSAEKSKSPATATIVFKGTRVNVRPAPVVASFSARGPNPETPEILKPDVIAPGLNILAAWPDKVGPSGIPTDKRKTEFNILSGTSMACPHVSGLAALLK 456
            AD + LP++ +         +YI S    +SP     +FK T +    APVV SFS+RGPN  T +++KPD+  PG+ ILAAWP      GI   +R T FNI+SGTSM+CPH++G+A  +K
Sbjct:  426 ADSYPLPSSVLDPNDLLATLRYIYSI---RSPGAT--IFKSTTILNASAPVVVSFSSRGPNRATKDVIKPDISGPGVEILAAWPSVAPVGGI---RRNTLFNIISGTSMSCPHITGIATYVK 539
The following BLAST results are available for this feature:
BLAST of CF509549 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH6.857e-4161.31Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
XSP1_ARATH7.616e-2448.78Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
CUCM1_CUCME5.109e-2043.44Cucumisin OS=Cucumis melo PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-057 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509549 ID=CF509549; Name=CF509549; organism=Citrus sinensis; type=EST; length=459bp
TCAAGACCTGCTAAAGGTGAGGTAGTGAAGAAGGCTGGTGGAGTTGGGAT
GATTTTGGCGAATGGGGTATTTGACGGTGAAGGATTAGTGGCTGATTGTC
ATGTTTTGCCTGCTACCTCTGTTGGTGCAGCTTCGGGGGATGAGATTAGG
AAGTATATTATGTCGGCTGAGAAGTCTAAGTCACCGGCTACAGCTACGAT
TGTTTTTAAGGGGACTCGAGTTAATGTGAGGCCAGCTCCAGTTGTGGCTT
CTTTTTCTGCTAGGGGGCCTAATCCAGAGACTCCTGAGATTTTGAAGCCT
GATGTGATTGCTCCTGGCTTGAATATACTTGCAGCTTGGCCAGATAAAGT
TGGACCTTCCGGAATTCCCACTGATAAGCGTAAAACTGAGTTTAATATAC
TTTCAGGAACTTCTATGGCTTGCCCACATGTTTCTGGGCTTGCTGCTCTG
TTAAAGGCG
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