CF509550

Overview
NameCF509550
Unique NameCF509550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length357
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_SOLLC (Plasma membrane ATPase 1 OS=Solanum lycopersicum GN=LHA1 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 3.454e-48
Identity = 98/119 (82.35%), Postives = 98/119 (82.35%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  511 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGL 629
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA4_ARATH (ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 7.694e-48
Identity = 96/119 (80.67%), Postives = 98/119 (82.35%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ+KDESI ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  515 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 633
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA2_SOLLC (Plasma membrane ATPase 2 (Fragment) OS=Solanum lycopersicum GN=LHA2 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 7.694e-48
Identity = 97/119 (81.51%), Postives = 98/119 (82.35%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KDESIA+LPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  259 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESIASLPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGL 377
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA3_NICPL (Plasma membrane ATPase 3 OS=Nicotiana plumbaginifolia GN=PMA3 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.005e-47
Identity = 96/119 (80.67%), Postives = 98/119 (82.35%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KDESI+ALP+DELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  511 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGL 629
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_NICPL (Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.005e-47
Identity = 96/119 (80.67%), Postives = 98/119 (82.35%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKM+TGDQLAIGKETGRRLGMGTNMYPSSALLGQ KDESI+ALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  512 VKMVTGDQLAIGKETGRRLGMGTNMYPSSALLGQTKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGL 630
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA11_ARATH (ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.239e-47
Identity = 96/119 (80.67%), Postives = 97/119 (81.51%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KDESI ALPID+LIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  511 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 629
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA9_ARATH (ATPase 9, plasma membrane-type OS=Arabidopsis thaliana GN=AHA9 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 6.514e-47
Identity = 94/119 (78.99%), Postives = 97/119 (81.51%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIA+LP+DELIEKADGFAGVFPEHKYEIVKRLQ  KHICGMTGDGVNDAPALK+                    VLTEPGL
Sbjct:  512 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGL 630
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA5_ARATH (ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=2 SV=3)

HSP 1 Score: 178.333 bits (451), Expect = 1.040e-44
Identity = 91/119 (76.47%), Postives = 93/119 (78.15%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD S+ ALP+DELIEKADGFAGVFPEHKYEIV RLQ R HICGMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  507 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQVKDSSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVNDAPALKKADIGIAVVDATDAARGASDIVLTEPGL 625
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_ORYSJ (Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.040e-44
Identity = 91/119 (76.47%), Postives = 95/119 (79.83%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ+KD S+ ALP+DELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  507 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQNKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGL 625
[Close]
BLAST of CF509550 vs. ExPASy Swiss-Prot
Match: PMA1_WHEAT (Plasma membrane ATPase OS=Triticum aestivum GN=ha1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 3.952e-44
Identity = 90/119 (75.63%), Postives = 94/119 (78.99%), Query Frame = 1 
Query:    1 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKXXXXXXXXXXXXXXXXXXXXVLTEPGL 357
            VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQ KD S+ +LP+DELIEKADGFAGVFPEHKYEIVKRLQ +KHI GMTGDGVNDAPALKK                    VLTEPGL
Sbjct:  507 VKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQSKDGSLESLPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVNDAPALKKADIGIAVDDATDAARSASDIVLTEPGL 625
The following BLAST results are available for this feature:
BLAST of CF509550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PMA1_SOLLC3.454e-4882.35Plasma membrane ATPase 1 OS=Solanum lycopersicum G... [more]
PMA4_ARATH7.694e-4880.67ATPase 4, plasma membrane-type OS=Arabidopsis thal... [more]
PMA2_SOLLC7.694e-4881.51Plasma membrane ATPase 2 (Fragment) OS=Solanum lyc... [more]
PMA3_NICPL1.005e-4780.67Plasma membrane ATPase 3 OS=Nicotiana plumbaginifo... [more]
PMA1_NICPL1.005e-4780.67Plasma membrane ATPase 1 OS=Nicotiana plumbaginifo... [more]
PMA11_ARATH2.239e-4780.67ATPase 11, plasma membrane-type OS=Arabidopsis tha... [more]
PMA9_ARATH6.514e-4778.99ATPase 9, plasma membrane-type OS=Arabidopsis thal... [more]
PMA5_ARATH1.040e-4476.47ATPase 5, plasma membrane-type OS=Arabidopsis thal... [more]
PMA1_ORYSJ1.040e-4476.47Plasma membrane ATPase OS=Oryza sativa subsp. japo... [more]
PMA1_WHEAT3.952e-4475.63Plasma membrane ATPase OS=Triticum aestivum GN=ha1... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-058 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509550 ID=CF509550; Name=CF509550; organism=Citrus sinensis; type=EST; length=357bp
GTTAAAATGATTACTGGAGATCAACTGGCAATAGGAAAGGAGACTGGACG
TCGTTTGGGAATGGGAACCAACATGTATCCTTCATCTGCTTTGCTAGGAC
AGGACAAGGATGAGTCTATCGCTGCTTTACCTATTGATGAACTGATAGAA
AAAGCTGACGGCTTTGCTGGTGTCTTCCCTGAACACAAGTATGAGATAGT
AAAACGCTTACAAGCTAGGAAACATATATGTGGGATGACTGGTGATGGTG
TCAACGATGCTCCTGCTCTCAAGAAGGCTGACATTGGGATAGCCGTTGCG
GATGCAACTGATGCTGCTCGTAGTGCTTCTGACATAGTCCTTACAGAACC
TGGCCTT
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