CF509552
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.354e-28 Identity = 60/91 (65.93%), Postives = 74/91 (81.32%), Query Frame = 3 Query: 93 NMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPP 365 +M EE++RLKYL+FVQ A + LL F +Y AK KSGPLKPGVESVEG VK VVGPVY+KYH +P+E+LK++D+KVD SVT+LD RVPP Sbjct: 13 DMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPP 103
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 3.336e-27 Identity = 54/85 (63.53%), Postives = 72/85 (84.71%), Query Frame = 3 Query: 108 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVP 362 EE+RLKYL+FVQVA I+V++CF +LY YAK SGPLKPGV++VEGTVK V+GPVY+K++ +P ELL F+DRKV+ S+ +L+ VP Sbjct: 16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVP 100
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 1.267e-26 Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 69 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPP 365 E+ V ++ ++E EE+RL+YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPP Sbjct: 15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPP 116
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.267e-26 Identity = 59/102 (57.84%), Postives = 77/102 (75.49%), Query Frame = 3 Query: 69 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPP 365 E+ V ++ ++E EE+RL+YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPP Sbjct: 15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPP 116
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.270e-18 Identity = 40/86 (46.51%), Postives = 61/86 (70.93%), Query Frame = 3 Query: 105 EEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVP 362 ++E +LK+LEF+QVA ++ CF LY AK +GPLK GVE++E V+ V+ P+Y+K+H +P +LL F+DRKVD+ ++ VP Sbjct: 36 DDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVP 121
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.659e-18 Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 3 Query: 108 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPP 365 EE+RLKYL+FV+ A ++ + F LY YAK SGPLKPGV+++E VK VV PVY +P+E +KF+D+ VD SVT LD VPP Sbjct: 6 EEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVY----YIPLEAVKFVDKTVDVSVTSLDGVVPP 87
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.305e-18 Identity = 46/86 (53.49%), Postives = 54/86 (62.79%), Query Frame = 3 Query: 108 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPP 365 +E LK+L FV++ATIH+L NLY YAK SGPLK VE VEG V VV PVY K+ +P LL F+D KV E K D PP Sbjct: 9 KEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPP 94
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16 Identity = 46/102 (45.10%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 60 MAEEKNVPSQQNMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPP 365 MAE+++ +QQ + + LKYL FVQ A + + F N+Y +AK KSGPL+PGV+ +EG VKNV P+Y+++ +P LKF+D V SVT +D +PP Sbjct: 1 MAEDED--NQQG----QGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPP 96
BLAST of CF509552 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.214e-14 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 180 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVP 362 LY YAK ++GPLKPGV +VE VK VV PVYD++H +P+ELLK+ DRKV E LD VP Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVP 62 The following BLAST results are available for this feature:
BLAST of CF509552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509552 ID=CF509552; Name=CF509552; organism=Citrus sinensis; type=EST; length=365bpback to top |