CF509562
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TIM17_ARATH (Mitochondrial import inner membrane translocase subunit Tim17 OS=Arabidopsis thaliana GN=TIM17 PE=2 SV=2) HSP 1 Score: 206.838 bits (525), Expect = 2.728e-53 Identity = 101/128 (78.91%), Postives = 106/128 (82.81%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGARLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNKGL 385 PCPDRILDD HF+KGTYNSP G+R GGTQ+V MNAPR GGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQG G+ASRSA+FGGVLLALIEGAGIMLNK L Sbjct: 10 PCPDRILDDIGGAFGMGAVGGSAFHFIKGTYNSPKGSRFVGGTQSVSMNAPRTGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLLALIEGAGIMLNKVL 137
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17A_DROME (Probable mitochondrial import inner membrane translocase subunit Tim17 1 OS=Drosophila melanogaster GN=Tim17b1 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 5.536e-30 Identity = 67/127 (52.76%), Postives = 82/127 (64.57%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLN 376 PCP RI++D +KG N+PSG RLSGG AVR + VGG+FAVWG FS DC++VY R+KEDPWN+II+GA TGG L+ R GL S SAL GG LLALIEG GI+++ Sbjct: 8 PCPFRIVEDCGGAFAMGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGLVGGNFAVWGATFSAIDCSLVYFRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVGGALLALIEGVGIVVS 134
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17B_HUMAN (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Homo sapiens GN=TIMM17B PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.233e-29 Identity = 67/128 (52.34%), Postives = 81/128 (63.28%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 379 PCP RI+DD +KG N+P G R L G AVR+ AP++GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G + SA+ GG+LLALIEG GI+L + Sbjct: 8 PCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTR 135
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17A_MOUSE (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Mus musculus GN=Timm17a PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.611e-29 Identity = 67/128 (52.34%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 379 PCP RI+DD KG NSP G RL G A++ AP++GGSFAVWGGLFST DC+MV +R KEDPWNSI +GA TG L+ R G + SA GG+LLALIEGAGI+L + Sbjct: 8 PCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQLGGSFAVWGGLFSTIDCSMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTR 135
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17A_RAT (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Rattus norvegicus GN=Timm17a PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.747e-29 Identity = 67/128 (52.34%), Postives = 79/128 (61.72%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 379 PCP RI+DD KG NSP G RL G A++ AP++GGSFAVWGGLFST DC MV +R KEDPWNSI +GA TG L+ R G + SA GG+LLALIEGAGI+L + Sbjct: 8 PCPWRIVDDCGGAFTMGTIGGGIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSTIDCGMVQIRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTR 135
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17B_MOUSE (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Mus musculus GN=Timm17b PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.686e-29 Identity = 66/128 (51.56%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 379 PCP RI+DD +KG N+P G R G AVR+ AP++GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R G + SA+ GG+LLALIEG GI+L + Sbjct: 8 PCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGILLALIEGVGILLTR 135
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17A_HUMAN (Mitochondrial import inner membrane translocase subunit Tim17-A OS=Homo sapiens GN=TIMM17A PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.686e-29 Identity = 66/128 (51.56%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 379 PCP RI+DD +KG NSP G RL G A++ AP++GGSFAVWGGLFS DC+MV +R KEDPWNSI +GA TG L+ R G + SA GG+LLALIEGAGI+L + Sbjct: 8 PCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTR 135
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17B_BOVIN (Mitochondrial import inner membrane translocase subunit Tim17-B OS=Bos taurus GN=TIMM17B PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.364e-28 Identity = 66/128 (51.56%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAGIMLNK 379 PCP RI+DD +KG N+P G R L G AVR+ AP++GGSFAVWGGLFST DC +V LR KEDPWNSI +GA TG L+ R + SA+ GG+LLALIEG GI+L + Sbjct: 8 PCPWRIVDDCGGAFTMGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVRLRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGILLALIEGVGILLTR 135
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17C_DROME (Probable mitochondrial import inner membrane translocase subunit Tim17 3 OS=Drosophila melanogaster GN=Tim17a1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.967e-28 Identity = 61/123 (49.59%), Postives = 79/123 (64.23%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGA--RLSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAG 364 PCP RI++D FLKG N+P+G RL GG V+M P + GSFAVWG FST DC +V+ RQ+ED WNSI++GAATGG L+ R G+ + + SAL G ++LA+IEGAG Sbjct: 7 PCPIRIVEDCGCAFMMGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSIAGSFAVWGATFSTVDCALVHYRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLVLAMIEGAG 129
BLAST of CF509562 vs. ExPASy Swiss-Prot
Match: TI17D_DROME (Probable mitochondrial import inner membrane translocase subunit Tim17 4 OS=Drosophila melanogaster GN=Tim17a2 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.508e-27 Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 2 Query: 2 PCPDRILDDXXXXXXXXXXXXXXXHFLKGTYNSPSGAR--LSGGTQAVRMNAPRVGGSFAVWGGLFSTFDCTMVYLRQKEDPWNSIIAGAATGGFLSMRQGLGSASRSALFGGVLLALIEGAG 364 PCP RI++D +LKG N+PSG R L GG ++VR+ P + GSFA+WG FST DC MV RQ+ED WN+I++GAATGG L+ R G+ + + SA G ++LA++EGAG Sbjct: 7 PCPIRIVEDCGCAFMMGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAIAGSFAIWGATFSTVDCVMVSYRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVLAMLEGAG 129 The following BLAST results are available for this feature:
BLAST of CF509562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509562 ID=CF509562; Name=CF509562; organism=Citrus sinensis; type=EST; length=385bpback to top |