CF509567
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509567 vs. ExPASy Swiss-Prot
Match: CP062_HUMAN (UPF0505 protein C16orf62 OS=Homo sapiens GN=C16orf62 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 9.395e-20 Identity = 63/195 (32.31%), Postives = 106/195 (54.36%), Query Frame = 1 Query: 16 STSSNHHKVDVVDHESH--DFFDPLRSPAANA--VALNKDVEDGXXXXXXXXXXXXXXXXKEWTTFKRFLMQKFPVSKMVSVSL-MPDVIIKTGKANV--KDSTTKHLKELDDPANFAEEDVKVITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLSIKVARLLMDTSVLQFYPTLFVLVVEIMDMLGNLVWERI 579 S++S+ VVD S D DPL AA A AL ++ + WT + ++ ++ ++ +S++L M K G A + + L+ELDD +++++ +T Q+YV+R+ EL +K AW ++ +V +LK+ I+ ++LL DTSV+QFYP+ FVL+ +I+D G LV+ERI Sbjct: 55 SSTSSSSSSSVVDPLSSVLDGTDPLSMFAATADPAALAAAMDSSRRKRDRDDNSVVGSDFEPWTNKRGEILARYTTTEKLSINLFMGSEKGKAGTATLAMSEKVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDTFGKLVYERI 249
BLAST of CF509567 vs. ExPASy Swiss-Prot
Match: CP062_PONAB (UPF0505 protein C16orf62 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18 Identity = 61/195 (31.28%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 16 STSSNHHKVDVVDHESH--DFFDPLRSPAANA--VALNKDVEDGXXXXXXXXXXXXXXXXKEWTTFKRFLMQKFPVSKMVSVSL-MPDVIIKTGKANV--KDSTTKHLKELDDPANFAEEDVKVITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLSIKVARLLMDTSVLQFYPTLFVLVVEIMDMLGNLVWERI 579 S++S+ VVD S D DPL AA A AL + + W + ++ ++ ++ +S++L M K G A + + L+ELDD +++++ +T Q+YV+R+ EL +K AW ++ +V +LK+ I+ ++L DTSV+QFYP+ FVL+ +I+D G LV+ERI Sbjct: 55 SSTSSSSSSSVVDPLSSVLDGTDPLSMFAATADPAALAAATDSSRKKRDRDDNSIVGSDFEPWANKRGEILARYTTTEKLSINLFMGSEKGKAGTATLAMSEKVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLPSDTSVIQFYPSKFVLITDILDTFGKLVYERI 249
BLAST of CF509567 vs. ExPASy Swiss-Prot
Match: CP062_DANRE (UPF0505 protein C16orf62 homolog OS=Danio rerio GN=zgc:163107 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.022e-18 Identity = 46/135 (34.07%), Postives = 85/135 (62.96%), Query Frame = 1 Query: 190 WTTFKRFLMQKFPVSKMVSVSLMPDVIIKTGKAN-----VKDSTTKHLKELDDPANFAEEDVKVITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLSIKVARLLMDTSVLQFYPTLFVLVVEIMDMLGNLVWERI 579 W++ + ++ +F ++ +S++L T KA+ V + L+ELDD ++ ++ ++ Q+YV+R+ EL +K AW ++ +V +LK+ I+ ++LL DTSV+QFYP+ FVL+ +I+D G LV++RI Sbjct: 118 WSSKRGEILSRFTTTEKLSINLFMGS--DTSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNLSQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDTFGGLVYDRI 250
BLAST of CF509567 vs. ExPASy Swiss-Prot
Match: CP062_RAT (UPF0505 protein C16orf62 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18 Identity = 45/135 (33.33%), Postives = 84/135 (62.22%), Query Frame = 1 Query: 190 WTTFKRFLMQKFPVSKMVSVSLMPDVIIKTGKAN-----VKDSTTKHLKELDDPANFAEEDVKVITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLSIKVARLLMDTSVLQFYPTLFVLVVEIMDMLGNLVWERI 579 W + ++ ++ ++ +S++L + G+A + + L+ELDD +++++ +T Q+YV+R+ EL +K AW ++ +V +LK+ I+ ++LL DTSV+QFYP+ FVL+ +I+D G LV+ERI Sbjct: 117 WANKRGEILARYTTTEKLSINLFMGS--EKGRAGAAASAMSEKVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDTFGKLVYERI 249
BLAST of CF509567 vs. ExPASy Swiss-Prot
Match: CP062_MOUSE (UPF0505 protein C16orf62 homolog OS=Mus musculus PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 8.794e-18 Identity = 46/133 (34.59%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 190 WTTFKRFLMQKFPVSKMVSVSLMPDVIIKTGKANVKDSTTK---HLKELDDPANFAEEDVKVITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLSIKVARLLMDTSVLQFYPTLFVLVVEIMDMLGNLVWERI 579 W + ++ ++ ++ +S++L G A + K L+ELDD +++++ +T Q+YV+R+ EL +K AW ++ +V +LK+ I+ ++LL DTSV+QFYP+ FVL+ +I+D G LV+ERI Sbjct: 117 WANKRVEILARYTTTEKLSINLFMGSEKGRGGAAASAMSEKVRTRLEELDDFEEGSQKELLNLTQQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDTFGKLVYERI 249
BLAST of CF509567 vs. ExPASy Swiss-Prot
Match: U505_DROME (UPF0505 protein CG8202 OS=Drosophila melanogaster GN=CG8202 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-17 Identity = 46/143 (32.17%), Postives = 89/143 (62.24%), Query Frame = 1 Query: 187 EWTTFKRFLMQKFPVSKMVSVS---LMPDVIIKTGKANVK------DSTTKHLKELDDPANFAEEDVKVITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLSIKVARLLMDTSVLQFYPTLFVLVVEIMDMLGNLVWERIKQK 588 +W++ + ++ +F ++ +S+S L+ + G ++K D T L++LD + + + +T QEY+ R +LK E+ ++W + RV +LK++I+ A++L DT+VLQFYP+ +VL+ +I+D+ G LV+ER++ K Sbjct: 94 QWSSRRLGILNRFTTNEKLSLSTSFLVSSGSLDGGNESIKAQTVVADKTKFRLEQLDHFDDGSMRHMMDLTQQEYIQRFEQLKQELIQSWHNDQRVKALKIAIQCAKMLADTTVLQFYPSQYVLITDILDVFGKLVYERLRAK 236
BLAST of CF509567 vs. ExPASy Swiss-Prot
Match: U505_DICDI (UPF0505 protein OS=Dictyostelium discoideum GN=DDB_G0273473 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.231e-16 Identity = 52/139 (37.41%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 190 WTTFKRFLMQKFPV--SKMVSVSLMPDVIIKTGKANVK-DSTTKHLKELDDPANFAEEDVKV--ITGQEYVSRLHELKDEIKRAWTAEDRVTSLKLSIKVARLLMDTSVLQFYPTLFVLVVEIMDMLGNLVWERIKQKL 591 W T K ++Q++ S + VS M +GK + + K L+EL+ +ED K + + + L L E+ +AW AE+RV SLK++I+ A+LL DTS+++FYP+ FV+ EI+D GNLV++RIK++L Sbjct: 148 WDTLKPSILQQYTSDDSNPIQVSFMSTGT--SGKIKIPINRLNKILEELEQD----KEDSKSTQFSQPDIIMDLETLHSELLKAWAAEERVRSLKIAIQTAKLLSDTSLIKFYPSKFVIATEILDTFGNLVYDRIKKRL 280 The following BLAST results are available for this feature:
BLAST of CF509567 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF509567 ID=CF509567; Name=CF509567; organism=Citrus sinensis; type=EST; length=593bpback to top |