CF509569

Overview
NameCF509569
Unique NameCF509569
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length546
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13417 contig Csv1_Contig13417:14..559. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF509569 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.476e-14
Identity = 52/187 (27.81%), Postives = 79/187 (42.25%), Query Frame = 1 
Query:    1 PAQTLLMAMDTSNDAAWV---PCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLTYG-SSTIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQXXXXXXXXXXXXXAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPI--GQPKRIKYTPLLKNPRRSSLYYVNLLAI 543
            P  +    MDT +D  W    PCT C    + +FN   S++F  L C++  C+ +P+ TC    C +   YG  ST    ++ +T +  T  VP   FGC +   G                   +    L    FSYC+ S+ + S S +L LG    G P+    T L+ +    + YY+ L  I
Sbjct:  105 PDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETSSVPNIAFGCGEDNQG--FGQGNGAGLIGMGWGPLSLPSQLGVGQFSYCMTSYGSSSPS-TLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGI 288
[Close]
BLAST of CF509569 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.595e-12
Identity = 50/188 (26.60%), Postives = 80/188 (42.55%), Query Frame = 1 
Query:    1 PAQTLLMAMDTSNDAAWV---PCTGCVGCSSTVFNSAQSTTFKNLGCQAAQCKQVPNPTCGGGACAFNLTYG-SSTIAANLSQDTISLATDIVPGYTFGCIQKATGNSVPPQXXXXXXXXXXXXXAQTQNLYQSTFSYCLPSFKALSFSGSLRLGPI------GQPKRIKYTPLLKNPRRSSLYYVNL 534
            PAQ     MDT +D  W    PCT C   S+ +FN   S++F  L C +  C+ + +PTC    C +   YG  S    ++  +T++  +  +P  TFGC +   G                   +    L  + FSYC+    + S   +L LG +      G P     T L+++ +  + YY+ L
Sbjct:  104 PAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVSIPNITFGCGENNQG--FGQGNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIGS-STPSNLLLGSLANSVTAGSPN----TTLIQSSQIPTFYYITL 284
The following BLAST results are available for this feature:
BLAST of CF509569 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP2_NEPGR6.476e-1427.81Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
NEP1_NEPGR1.595e-1226.60Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-077 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_G02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509569 ID=CF509569; Name=CF509569; organism=Citrus sinensis; type=EST; length=546bp
CCGGCACAAACCTTGCTCATGGCCATGGATACTAGCAATGATGCTGCTTG
GGTTCCATGCACTGGCTGTGTTGGCTGCTCTTCCACTGTTTTTAATTCTG
CTCAATCCACCACATTCAAAAACCTTGGTTGCCAAGCTGCTCAATGCAAG
CAGGTACCTAATCCCACCTGCGGGGGTGGCGCGTGTGCATTCAATTTGAC
CTACGGCAGCTCCACCATTGCCGCAAACCTCTCACAGGACACTATCTCCC
TGGCCACTGATATAGTCCCTGGTTACACCTTCGGCTGCATCCAAAAGGCC
ACGGGCAACTCGGTGCCGCCCCAAGGCCTGTTGGGCCTGGGTCGTGGCTC
ATTATCCCTTTTGGCACAAACACAGAACCTCTATCAGTCCACTTTTTCTT
ACTGTTTGCCCAGCTTCAAGGCACTTAGCTTTTCTGGGTCATTAAGATTA
GGACCCATTGGTCAGCCCAAGCGGATTAAGTATACACCATTGCTTAAAAA
CCCAAGAAGATCATCACTTTACTATGTTAATTTGTTGGCCATTAGG
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