CF509576
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 4.480e-43 Identity = 101/223 (45.29%), Postives = 129/223 (57.85%), Query Frame = 1 Query: 82 KPFTFSAGRK----------------SHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE---TPAAAPKSSVKANS-QKSV--PKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEKPQV--NQYGYLGSFPNDGELGFKPFVPTADDTPLYFNSDQGSNSFDCSDFGWGD 678 KPF F+A K ++ V+ EQA+KS++RKRKNQYRGIRQRPWGKWAAEIRDP KG R WLGTF+T IRG KAKVNFP+E + + + S K N+ QKSV P ++ VQ + + Y NNS + + ++S +EEKPQ+ NQ+G SF G G++ YF+SDQGSNSFDCS+FGW D Sbjct: 78 KPFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSDQGSNSFDCSEFGWSD 289 HSP 2 Score: 22.3274 bits (46), Expect = 4.480e-43 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 3 Query: 684 PKTPEISSVL 713 PKTPEISS+L Sbjct: 292 PKTPEISSML 301
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.318e-38 Identity = 99/211 (46.92%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 82 KPFTFSAGRK------SHGSTAVKHVE----QAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDET-PAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEKPQVNQYGYLGSFPNDGELGFKPFVPTADDTPLYFNSDQGSNSFDCSDFGWGDR 681 KPF F++ K + GS K V A+KS RKRKNQYRGIRQRPWGKWAAEIRDP +G R+WLGTF T IRG KAKVNFP+E A + K SVKAN QK V K +P P+L QN + + N+ +EEK QV S N+ + G V + YF+SDQGSNSFDCS+FGW D+ Sbjct: 81 KPFVFTSTPKPAVSAAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPNP-SPALVQNSNI-------SFENMCFMEEKHQV-------SNNNNNQFGMTNSVDAGCNGYQYFSSDQGSNSFDCSEFGWSDQ 276
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33 Identity = 85/179 (47.49%), Postives = 105/179 (58.66%), Query Frame = 1 Query: 148 AKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEKPQVNQYGYLGSFPNDGELGFKPFVPTADD-TPL---YFNSDQGSNSFDCSDFGW 672 A KS +RKRKNQ+RGIRQRPWGKWAAEIRDP KGVRVWLGTFN+ IRGKKAKVNFP E P A K + + K+ PK+ + +P++ F+ L N++ Y + + KP V P++ PFVP + P+ NSDQGSNSF CSDFGW Sbjct: 108 AAKSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP-EAPTTAQKRRAGSTTAKA-PKSSVEQ-KPTVKPAFNNLANANAFVYPSANFTSNKPFVQ--------PDN-----MPFVPAMNSAAPIEDPIINSDQGSNSFGCSDFGW 270
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.258e-22 Identity = 65/153 (42.48%), Postives = 74/153 (48.37%), Query Frame = 1 Query: 127 AVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD---------ETPAAAPKS--------------SVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILE 516 AVK + + RKRKN YRGIR+RPWGKWAAEIRDP KGVRVWLGTFNT IRG KAK+NFPD P ++P+S S SQ S P C+ QN Y D D +S LE Sbjct: 60 AVKKEQATEPGKRRKRKNVYRGIRKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLE 212
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.987e-19 Identity = 47/107 (43.93%), Postives = 62/107 (57.94%), Query Frame = 1 Query: 151 KKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYL 471 ++ +R+RKN YRGIRQRPWGKWAAEIRDP+KGVRVWLGTF T IRG+KAK+NFP+ + N + + + + + L DY+ Sbjct: 39 ERDGKRERKNLYRGIRQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEEEADTKPGGNQNELISENQVESLSEDLMALEDYM 145
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18 Identity = 49/124 (39.52%), Postives = 69/124 (55.65%), Query Frame = 1 Query: 163 ERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA-----AAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEE 519 ++K+ ++Y+GIR+RPWG+WAAEIRDP KGVRVWLGTFNT IRG KAK+NFP+E+ A V+ N + + A +S S +F + N+ + LE+ Sbjct: 18 KKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPDTLLIDTQWLED 141
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: EF109_ARATH (Ethylene-responsive transcription factor ERF109 OS=Arabidopsis thaliana GN=ERF109 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17 Identity = 50/116 (43.10%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 91 TFSAGRKSHGSTAVKHVEQAKKSTERK-RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFP-------DETPAAAPKSSVKANSQKSV 414 T S+ R+ S K E K +RK +KN YRG+RQRPWGK+AAEIRDP + RVWLGTF T RG +AK+NFP +P AA KA++ SV Sbjct: 104 TSSSNRRRESSPVAKKAEGGGKIRKRKNKKNGYRGVRQRPWGKFAAEIRDPKRATRVWLGTFETAEDAARAYDRAAIGFRGPRAKLNFPFVDYTSSVSSPVAADDIGAKASASASV 219
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16 Identity = 48/126 (38.10%), Postives = 61/126 (48.41%), Query Frame = 1 Query: 172 RKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFDYLNNSDQDYYNNVSILEEK-PQVNQYGY 546 RK YRG+RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ A+ S+ +Y ++++Q YY+N + P NQY Y Sbjct: 88 RKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPP--------------------NYYSSNNQIYYSNPQTNPQTIPYFNQYYY 193
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.086e-16 Identity = 48/124 (38.71%), Postives = 64/124 (51.61%), Query Frame = 1 Query: 121 STAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSV-----------KANSQKSVPKACLSPVQPSLNQN 459 +TA E + S ++ R+ +YRG+RQRPWGKWAAEIRDP K RVWLGTF+ RG KAK+NFP+ P S+ S+ S L P++P+ NQ+ Sbjct: 165 TTATASSETSSFSGDQPRR-RYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPASNQS 287
BLAST of CF509576 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16 Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 1 Query: 85 PFTFSAGRKSHGSTAVKHVEQAKKSTERKRKNQYRGIRQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAP 378 P +F+ SH + + +A R++K +YRG+RQRPWGKWAAEIRDP + RVWLGTF+T RG KAK+NFP++ P Sbjct: 45 PSSFARVDSSHNPIE-ESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDVRILPP 141 The following BLAST results are available for this feature:
BLAST of CF509576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509576 ID=CF509576; Name=CF509576; organism=Citrus sinensis; type=EST; length=723bpback to top |