CF509577

Overview
NameCF509577
Unique NameCF509577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length520
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1694 contig Csv1_Contig1694:392..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP2_ARATH (Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 3.002e-87
Identity = 149/174 (85.63%), Postives = 158/174 (90.80%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGWGPHAYFQMLADSRND-QESNNANCL 520
            SVLITGVITDAIKDAVGRPRPDFFWRCFPDG G+F NVT+NV+CTG   V+KEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFD+RGHVAKLCIV LP L+AAL+GVSRVDDYWHHWQDVFGGAIIG  V+ FCYLQFFPPPYD DGWGPHAYFQMLADSRND Q+S   N L
Sbjct:  106 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGIGIFHNVTKNVLCTGAKDVVKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDQRGHVAKLCIVILPLLVAALVGVSRVDDYWHHWQDVFGGAIIGLTVATFCYLQFFPPPYDPDGWGPHAYFQMLADSRNDVQDSAGMNHL 279          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP3_ARATH (Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 2.088e-72
Identity = 120/170 (70.59%), Postives = 143/170 (84.12%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGWGPHAYFQMLADSRNDQESNNA 511
            SVL+T V+TDAIK+AVGRPRPDFFWRCFPDGK ++D++  +V+C G   VI+EGHKSFPSGHTSWSF+GLGFLSLYLSGKI+ FD +GHVAKLCIV LP L AAL+G+SRVDDYWHHWQDVF G ++G  +S  CYLQFFPPPY T+GWGP+AYFQ+L  +R    +N A
Sbjct:  156 SVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLG-DVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEGWGPYAYFQVLEAARVQGAANGA 324          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: LPP1_ARATH (Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 9.396e-65
Identity = 109/156 (69.87%), Postives = 130/156 (83.33%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGWGPHAYFQ 469
            +VLITGVITD+IK A GRPRP+F+WRCFPDGK ++D +   VVC G+   +KEGHKSFPSGHTSWSFAGL FLSLYLSGKI+ F+  GHVAKLC+V  P L A L+G+SRVDDYWHHWQDVF GA+IGT+V+ FCY QF+P PY  +GWGP+AYF+
Sbjct:  131 AVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALG-GVVCHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNNEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGTLVAAFCYRQFYPNPYHEEGWGPYAYFK 285          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: PPC1B_MOUSE (Phosphatidate phosphatase PPAPDC1B OS=Mus musculus GN=Ppapdc1b PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 6.347e-37
Identity = 78/168 (46.43%), Postives = 101/168 (60.12%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVF--DRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGWGPHAYFQMLADSRNDQE 499
            ++ + GV T+ IK  VGRPRPDFF+RCFPDG    D     + CTG   V+ EG KSFPSGH+S++FAGL F S YL+GK+  F    RG   +LC    P L AA+I +SR  DY HHWQDV  G++IG   ++ CY Q++PP  D +   P      L  S+   E
Sbjct:   92 ALALNGVFTNIIKLIVGRPRPDFFYRCFPDGLAHSD-----LTCTGDEDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRLCAFLSPLLFAAVIALSRTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDVECHKPFQDKHKLPSSQKPSE 254          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: PPC1B_XENLA (Phosphatidate phosphatase PPAPDC1B OS=Xenopus laevis GN=ppapdc1b PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 1.414e-36
Identity = 74/154 (48.05%), Postives = 99/154 (64.29%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGWGPH 457
            S+ + G+ T+ +K  VGRPRPDF +RCFPDG+      +  + CTG   ++ EG KSFPSGH+S++FAGLGF +LYL+GK+R F    RGH  +LC   +P L A  I +SR  DY HHWQDV  GA IG   +F CY Q++P   + D   P+
Sbjct:   55 SLALNGIFTNTVKLIVGRPRPDFLFRCFPDGQE-----SPGLHCTGDPELVIEGRKSFPSGHSSFAFAGLGFTALYLAGKLRCFSPCGRGHSWRLCASLIPLLCAIAIALSRTCDYKHHWQDVVVGAFIGLFFAFLCYRQYYPSLVERDCHQPY 203          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: PPC1B_HUMAN (Phosphatidate phosphatase PPAPDC1B OS=Homo sapiens GN=PPAPDC1B PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.412e-36
Identity = 73/149 (48.99%), Postives = 96/149 (64.43%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVF--DRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTD 442
            ++ + GV T+ IK  VGRPRPDFF+RCFPDG    D     ++CTG   V+ EG KSFPSGH+S++FAGL F S YL+GK+  F    RG   + C    P L AA+I +SR  DY HHWQDV  G++IG   ++ CY Q++PP  D +
Sbjct:   55 ALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSD-----LMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDAE 198          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: PPC1A_HUMAN (Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens GN=PPAPDC1A PE=1 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 5.940e-35
Identity = 72/167 (43.11%), Postives = 103/167 (61.68%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGWGPHAYFQMLADSRNDQ 496
            ++ + GV T+ IK  VGRPRPDFF+RCFPDG      +   + CTG   ++ EG KSFPS H+S++F+GLGF + YL+GK+  F    RG   +LC   LP   A +I +SR+ DY HHWQD F G +IG I ++ CY Q +PP  +T    P+   ++ A  + ++
Sbjct:   90 ALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV-----MNSEMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACHKPYVSLRVPASLKKEE 251          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: PPC1A_MOUSE (Phosphatidate phosphatase PPAPDC1A OS=Mus musculus GN=Ppapdc1a PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.323e-34
Identity = 73/167 (43.71%), Postives = 104/167 (62.28%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPPPYDTDGWGPHAYFQMLADSRNDQ 496
            ++ + GV T+ IK  VGRPRPDFF+RCFPDG  V ++  R   CTG   ++ EG KSFPS H+S++F+GLGF + YL+GK+  F    RG   +LC   LP   A +I +SR+ DY HHWQD F G +IG I ++ CY Q +PP  +T    P+   ++    + ++
Sbjct:   90 ALALNGVCTNTIKLIVGRPRPDFFYRCFPDG--VMNSEMR---CTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANTACHKPYVSLRVPTSLKKEE 251          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: DPP1_SCHPO (Probable diacylglycerol pyrophosphate phosphatase 1 OS=Schizosaccharomyces pombe GN=dpp1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.954e-27
Identity = 59/146 (40.41%), Postives = 96/146 (65.75%), Query Frame = 2
Query:    2 SVLITGVITDAIKDAVGRPRPDFFWRCFP----DGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPP 427
            S ++ G+    +K+AVGRPRPDF  RC P       G+ D ++ +V  + +  V+++G +SFPSGHTS+SFAGLGFL+++L+G++++F  +    K+ +  +P  +A+ IG+SR  DY HH +D+  GA+ G  +++  Y Q FPP
Sbjct:   99 STMVCGLCVSLLKNAVGRPRPDFLARCQPFESTPKTGLVDVLSCSVPWSDK--VLQDGFRSFPSGHTSFSFAGLGFLAIFLAGQLKMFRNKTSSWKVVVPLVPLSIASWIGLSRSQDYRHHKEDIAVGALFGFAIAYVVYRQLFPP 242          
BLAST of CF509577 vs. ExPASy Swiss-Prot
Match: DPP1_YEAST (Diacylglycerol pyrophosphate phosphatase 1 OS=Saccharomyces cerevisiae GN=DPP1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.589e-22
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 2
Query:   14 TGVITDAIKDAVGRPRPDFFWRCFP-DGKGVFDNVTRNVVCTGQNHV-IKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQDVFGGAIIGTIVSFFCYLQFFPP 427
            T   T+ IK+ +GR RPDF  RC P +G  +    T   VCT +NH  + +G ++ PSGH+S SFAGLG+L  +L G++        + +  + FLP L AALI +SR  DY HH+ DV  G+++G I++ F Y + FPP
Sbjct:  110 TSFFTNFIKNWIGRLRPDFLDRCQPVEGLPLDTLFTAKDVCTTKNHERLLDGFRTTPSGHSSESFAGLGYLYFWLCGQLLTESPLMPLWRKMVAFLPLLGAALIALSRTQDYRHHFVDVILGSMLGYIMAHFFYRRIFPP 249          
The following BLAST results are available for this feature:
BLAST of CF509577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
LPP2_ARATH3.002e-8785.63Lipid phosphate phosphatase 2 OS=Arabidopsis thali... [more]
LPP3_ARATH2.088e-7270.59Putative lipid phosphate phosphatase 3, chloroplas... [more]
LPP1_ARATH9.396e-6569.87Lipid phosphate phosphatase 1 OS=Arabidopsis thali... [more]
PPC1B_MOUSE6.347e-3746.43Phosphatidate phosphatase PPAPDC1B OS=Mus musculus... [more]
PPC1B_XENLA1.414e-3648.05Phosphatidate phosphatase PPAPDC1B OS=Xenopus laev... [more]
PPC1B_HUMAN2.412e-3648.99Phosphatidate phosphatase PPAPDC1B OS=Homo sapiens... [more]
PPC1A_HUMAN5.940e-3543.11Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens... [more]
PPC1A_MOUSE1.323e-3443.71Phosphatidate phosphatase PPAPDC1A OS=Mus musculus... [more]
DPP1_SCHPO5.954e-2740.41Probable diacylglycerol pyrophosphate phosphatase ... [more]
DPP1_YEAST2.589e-2242.14Diacylglycerol pyrophosphate phosphatase 1 OS=Sacc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_125000-085 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-79_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF509577 ID=CF509577; Name=CF509577; organism=Citrus sinensis; type=EST; length=520bp
TTCTGTGCTCATTACTGGTGTTATAACTGATGCAATTAAAGATGCTGTTG
GTCGTCCTCGCCCAGATTTCTTTTGGCGGTGTTTTCCTGATGGTAAAGGG
GTCTTTGATAATGTAACAAGGAACGTCGTGTGTACTGGGCAAAATCATGT
TATTAAGGAAGGGCACAAAAGTTTCCCAAGTGGACATACTTCGTGGTCTT
TTGCTGGTCTTGGTTTTCTTTCATTGTACTTGTCAGGAAAAATCAGGGTA
TTTGATCGTAGAGGCCATGTTGCAAAGCTCTGTATTGTTTTCCTACCATT
TCTTCTAGCTGCTCTGATAGGAGTTTCTCGAGTTGATGACTATTGGCATC
ATTGGCAAGATGTCTTTGGTGGAGCTATCATAGGGACAATTGTTTCTTTC
TTTTGTTACTTGCAATTCTTTCCACCTCCATATGATACAGATGGCTGGGG
GCCTCATGCATATTTTCAGATGTTGGCAGATTCTCGAAATGACCAGGAAT
CTAACAACGCCAACTGTCTC
back to top