CF509636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_WHEAT (Histone H3.2 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_TOBAC (Histone H3.2 OS=Nicotiana tabacum GN=B34 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_PETCR (Histone H3.2 OS=Petroselinum crispum GN=H3-7 PE=3 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_PEA (Histone H3.2 OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_ORYSJ (Histone H3.2 OS=Oryza sativa subsp. japonica GN=Os01g0866200 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_ORYSI (Histone H3.2 OS=Oryza sativa subsp. indica GN=OsI_019426 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_ONOVI (Histone H3.2 OS=Onobrychis viciifolia PE=2 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_MEDSA (Histone H3.2 OS=Medicago sativa GN=H3-1.1 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_MAIZE (Histone H3.2 OS=Zea mays GN=H3C2 PE=1 SV=2) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17
BLAST of CF509636 vs. ExPASy Swiss-Prot
Match: H32_EUPES (Histone H3.2 OS=Euphorbia esula GN=H3 PE=2 SV=3) HSP 1 Score: 174.096 bits (440), Expect = 4.846e-48 Identity = 91/112 (81.25%), Postives = 91/112 (81.25%), Query Frame = 2 Query: 104 ATASSLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 439 A LATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF GLFEDTNLCAIHAKRVTIMPKDIQL Sbjct: 16 APRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 127 HSP 2 Score: 37.3502 bits (85), Expect = 4.846e-48 Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP 107 MARTKQTARKSTGGKAP Sbjct: 1 MARTKQTARKSTGGKAP 17 The following BLAST results are available for this feature:
BLAST of CF509636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 190
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Sequences
The
following sequences are available for this feature:
EST sequence >CF509636 ID=CF509636; Name=CF509636; organism=Citrus sinensis; type=EST; length=441bpback to top |